Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01474 ATGACCAATAAACACAAGCGAATCCACGCTGCCGTCACTGATGACGACATCACCGCTGTTGCTCCTCTTCATAATCATCATCATGTTCCTCATCAGTTCCCGCAGGTGTCCGCCGTTGAAGGCTCATCCTCCTCCGCGGCTGAGCCTTTTGCCAATGGGATTCATGCTGCGGTGGCAAGTGGAGTCTCAGCACCCTCGTTATCATCAGGAGGCGGTAGTGGTGAAGGAGAAGGGGCAGTTGCGGTGGCAAAGGAGAAGAGAAGGGCGGTGGAGGAACCAGTGGACAAGGCCAGCCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCTGCTAGGTCTATGAACGCAAACAGGCTGAAAAGAAAGAGGTTGAAGGAGAAGAAGGAGGTGCTTGATGAGAATGAGTGCAAAGTTCCTTTGCCTGATTACCGTGCAAATCTTGACGAGCGTCATGGATCAACACAGAAAGAGATAGAATATTGA 489 0.5112 MTNKHKRIHAAVTDDDITAVAPLHNHHHVPHQFPQVSAVEGSSSSAAEPFANGIHAAVASGVSAPSLSSGGGSGEGEGAVAVAKEKRRAVEEPVDKASLQKQRRMIKNRESAARSMNANRLKRKRLKEKKEVLDENECKVPLPDYRANLDERHGSTQKEIEY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01474 162 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 71 115 IPR043452 GO:0003700|GO:0045893
Aip01g01474 162 MobiDBLite consensus disorder prediction 62 119 - -
Aip01g01474 162 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 71 115 - -
Aip01g01474 162 Coils Coil 116 136 - -
Aip01g01474 162 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01474 Aip-Chr1 47903947 47906144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01474 15 161 bZIP Transcription Factor Family AT5G44080 33.987 5.67e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01474 K14432 - ahf:112720842 86.6557