Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01465 ATGAGGATGAAGGCGTTCCTAGCACTGCAATTCGCGAGATTTCTCTCCTCAAGGAAATGCAGCATAGGAATATTGTTAGATAACTGGAGCGTGAAGGCCATCCGCAGAAAGACCACCGGCACTGGCAGGATGAGGTACCTCCGTCACGTGCCTTGCCAATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGGAGAGACTGTACATGGGAATCATCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGTAGCGTTACAAAGTTTGAAATCAAGGGGTATTCGATTCCCTAGCCATGACAACGGGAGCTTGGCGCCTATTTTCACTCCTCTACGTTTGGTGTCTGAGGCTGAACTTGATCTTCCACACCAGACTCAGCATGATGATATTCCTGTGCAGAGTTTTACTCCTGAACAAACTAAGGAAGCTTTTGATGTTGCTAGAAATAGCATTGAGCTTCTTTCTACTATGTTGCCTTCTTCTCCACAACAAGATGTCTTGCAGGTAGATTTTATATATTTAGTTTAG 561 0.4581 MRMKAFLALQFARFLSSRKCSIGILLDNWSVKAIRRKTTGTGRMRYLRHVPCQFKSGFREGTEAAPRKKGAAASGETVHGNHHHLGQALLEETRVALQSLKSRGIRFPSHDNGSLAPIFTPLRLVSEAELDLPHQTQHDDIPVQSFTPEQTKEAFDVARNSIELLSTMLPSSPQQDVLQVDFIYLV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01465 186 PANTHER TOM1-LIKE PROTEIN 1 98 182 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip01g01465 186 SUPERFAMILY GAT-like domain 105 180 - -
Aip01g01465 186 MobiDBLite consensus disorder prediction 59 78 - -
Aip01g01465 186 PANTHER TOM1-LIKE PROTEIN 1 98 182 - -
Aip01g01465 186 Gene3D - 16 67 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01465 Aip-Chr1 46962269 46963654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01465 28 74 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 82.979 3.78e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01465 - - aip:107624163 176.792