Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01456 ATGTCTCAGGTTAGGGTTGCTCTTATGATACTGATGGCTTACCTTTCATACCTGCTTGTTGAGATATTTATATTCCTTTATGTTGGGATGGATGCACTGGACATAGAGAAGTGGCGATTCATAAGCCAAAGTCCTGGAAAATCAGTTGGGATCAGTTCAGTGCTTCTAGGACTTATCCTATTTGGAAGAGCAGCATTTGTTTTCCCTCTCTCATTCTTATCCAATTTGCTCCAGAAATCCCCACATGTGAAAATTGACATGAAGCAACAAGTCACAATCTGGTGGTCTGGTCTCATGCGAGGTGCTGTTTCTATAGTACTTGCTTACAACCAGATGAAGTATCCAAGTGATGCAGATAAGCATCTCTTGGCGTGGCAGACTGGCCTCTCCAGAAATCAGAATATTGTACTTGCTTCGATCCTCTCTGCTCGCGATTCGAGCTTCGAGTCTCTCCGCTCGGGTTCGAGCTTTGAGCCTCTTCGCTCGCGTTCGAGCTTCGATCCCCTCTGCTCGCGTTCGTTCATCACCACCGGTTACTATTTCACAGCATTTTTGGTAATAATGTTGATGTTTCAAGCTTCTCTAGTTTCTGCTCGCCATTCATCTCTTACCAAAAGAAGAGTGGCAGGAGTTGATTCAGGTTCCTCTCTTATTTAA 657 0.4444 MSQVRVALMILMAYLSYLLVEIFIFLYVGMDALDIEKWRFISQSPGKSVGISSVLLGLILFGRAAFVFPLSFLSNLLQKSPHVKIDMKQQVTIWWSGLMRGAVSIVLAYNQMKYPSDADKHLLAWQTGLSRNQNIVLASILSARDSSFESLRSGSSFEPLRSRSSFDPLCSRSFITTGYYFTAFLVIMLMFQASLVSARHSSLTKRRVAGVDSGSSLI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01456 218 PANTHER SODIUM/HYDROGEN EXCHANGER 20 115 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip01g01456 218 PANTHER SODIUM/HYDROGEN EXCHANGER 3 20 115 - -
Aip01g01456 218 Pfam Sodium/hydrogen exchanger family 14 108 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01456 Aip-Chr1 46405953 46408500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01456 5 111 Antiporters AT3G05030 51.974 1.09e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01456 - - ahf:112742336 181.8