Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip01g01455 | ATGAGAAGGGAAAAATTCAAGAGCAAACCCACCGGTCGCCACCAGTTCTCCACGCCGGAAGATCTCCGTATGCAAGAAGTACATTTTCTTCCTTTCAATCCAACTGATAAGAGGACTGCATTGACCTATATTGATCAAGATGGTAAAATGTATAGAATCCTACACCTTGCCCACAACAAATCAGACATCGAACACAGAGTTCATGCAGTGATTGATAAGTTTGCAGAACGCGGTCTGCGATCTCTTGCTGTAGCATACCAGGAAGTTCCCGATGGAAGGAAAGAAAGTGCTGCAGGCCCATGGCAGTTTATTGGCCTTATGCCCCTCTTTGACCCACCTAGACATGATAGTGCCGAAACAATACGGAGGGCACTAAATCTCAGAGACAAGGATGAATCCATTGCTGCCTTGCCTATTGATGAACTAATCGAAAAAGCAGATGGATTTGCTGGTGTATTTCCTAAACACAAGTATAAGATTGTGAAGCGTTTGCAAGTGAGGAAACATATCTGTGGAATATCTAGTGATGGAGTGAATGATGCACCTGCTCTAAAGAAGGCAGACATTGGTATAGCTGTCGCCGATGCCACGGATGCTGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGTCTTAGTGTTATCATAAGTGCTTGCTAG | 663 | 0.4419 | MRREKFKSKPTGRHQFSTPEDLRMQEVHFLPFNPTDKRTALTYIDQDGKMYRILHLAHNKSDIEHRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAAGPWQFIGLMPLFDPPRHDSAETIRRALNLRDKDESIAALPIDELIEKADGFAGVFPKHKYKIVKRLQVRKHICGISSDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAC | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip01g01455 | 220 | Gene3D | - | 22 | 110 | IPR023299 | GO:0000166 | |
| Aip01g01455 | 220 | PANTHER | PLASMA MEMBRANE ATPASE | 128 | 219 | - | - | |
| Aip01g01455 | 220 | PANTHER | PLASMA MEMBRANE ATPASE | 24 | 127 | - | - | |
| Aip01g01455 | 220 | Pfam | haloacid dehalogenase-like hydrolase | 116 | 188 | - | - | |
| Aip01g01455 | 220 | PRINTS | P-type cation-transporting ATPase superfamily signature | 105 | 116 | - | - | |
| Aip01g01455 | 220 | PRINTS | P-type cation-transporting ATPase superfamily signature | 174 | 193 | - | - | |
| Aip01g01455 | 220 | PRINTS | P-type cation-transporting ATPase superfamily signature | 197 | 209 | - | - | |
| Aip01g01455 | 220 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 24 | 127 | - | - | |
| Aip01g01455 | 220 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 128 | 219 | - | - | |
| Aip01g01455 | 220 | SUPERFAMILY | HAD-like | 64 | 219 | IPR036412 | - | |
| Aip01g01455 | 220 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 26 | 218 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Aip01g01455 | 220 | Gene3D | - | 111 | 126 | IPR023214 | - | |
| Aip01g01455 | 220 | Gene3D | - | 129 | 211 | IPR023214 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip01g01455 | Aip-Chr1 | 46400754 | 46402667 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip01g01455 | 19 | 220 | Primary Pumps ATPases | AT3G47950 | 70.565 | 1.39e-112 | 342 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip01g01455 | K01535 | - | ahf:112729570 | 329.717 |