Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01452 ATGAAACACGAGCTTCTTCCTCTCTCTGTCGCACGAGCTACTTCTTCTCTCCATGGCTACTACTTCTGCTTCTTCCGCCGCTGCCGCCGTCGCTTGTGGCGCACAATCTCTCTCTGTCATCCCTTGCGTTGCACGAGATCCCTCCGCCGCCGCTCTCGTCTACTCCCATTGCGTCTACTCCACCGCCATTCTCATCGAATCTACTCCCTCTGGCGCCTCTTCCATCTAATCTCAACTCGCTCTCTCAGTTCTTCTCGTAACCATCTCAAATTTCAGAAAGATAGGCACAGCAAGATTCACATATCTCATGGGTTGAGGGATAGAAGGGTGAGGCTTTCAAGCGAAATAGTGCGCAAGTTCTTTGATCTTCAGGACATGTTGGAGTTCGACAAGCCCAGCAACACGCTCGAATGGCTTTTCACCAGTATCTAA 432 0.5093 MKHELLPLSVARATSSLHGYYFCFFRRCRRRLWRTISLCHPLRCTRSLRRRSRLLPLRLLHRHSHRIYSLWRLFHLISTRSLSSSRNHLKFQKDRHSKIHISHGLRDRRVRLSSEIVRKFFDLQDMLEFDKPSNTLEWLFTSI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01452 143 ProSiteProfiles TCP domain profile. 92 143 IPR017887 -
Aip01g01452 143 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 85 141 IPR005333 GO:0003700
Aip01g01452 143 Pfam TCP family transcription factor 92 141 IPR017887 -
Aip01g01452 143 PANTHER TRANSCRIPTION FACTOR TCP12 85 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01452 Aip-Chr1 46341114 46341874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01452 92 139 TCP Transcription Factor Family AT1G67260 70.833 3.19e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip01g01452 TCP 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01452 - - aip:107617991 229.95