Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01436 ATGAGCAACGGGGAGCTTTTTAGCATCGAACCTCTCGAGCTCAGGTTCCCCTTTGAGTTGAAGAAGCAGATCTCGTGCGCTCTCCAATTGTTCAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACTAATCCGAAGAAGTATTGTGTTCGTCCAAACACAGGAATTGTCTTGCCACGATCAACATGTGATATCATGGTTGCCATGCAGGCGCAAAAGGAAGCGCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTGAAAACTTTTGACGGTGCTTCTACAAAAGATATCAATTCAGAAATGTTCAACAAGGAGGCAGGGCATTTGGTTGAGGAGTGTAAATTGAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCGCCTAGAGGTTCTGTTTCAGAAAATGGGAATGTCAGTAGTGTTGACTTCACACAAGCATCAAGAGGATTTACTGAAAGATCCGATACTCAATACAAATATGCAGAGGCAAGGGCTCTTATCACAAGATTGACTGAAGAAAAAAGTAATGCAATTCAACAGAACAACGAGTGCCATCAGGAACCGATGGATAGCATTCTGGAAGTAGAAAACATTGGGGAATGTCAGAACGGGCCGCTACACGCTTTGGGGTGTGCTGGGTCGGTGGAAGGTGAGGAACCGAACGGGCGGCGCGGGTACCGGATCGGAGGCGATGGTGAAGGCTCATTGTCGACACAGGCAGTACACGTAGAAGGCGATGGTAAGTCCGAAATGGTCAATGATGATAGGGGACTGAACGACGAGCTCTGTAACGATGATGCTTCTGAACACAGTGGTGGAGCTCAACAAATTGACATTACACGGCGGGGAATTGAAACGTCTTGTCACAGAATTATGCCAGAGATTAATAAAAGAGATGGATACGGTGATGATGAGGGTAGTATGGAGGGCAGAACATGTGCAAACGATGATGATGCCACAGAATTATCAGTACTAAGTTGCAGCAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCACTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCAGAGAACATGATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAACAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATCCTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGGTAGCGGCACCAAGTATTTCCTGACCTACTCGGTTAATTGGGGTGATAACGTCTCTAATATCGCAACACGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAGAGGCAGAACAAAGCAAGTGTTTTCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAGGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGAGGAAAATCATGGCGATCAAGGAGATGAATTTGGGTGCCTCTAAGGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGATCCTTGCTATGTTCACAAGGCCATAAACACTGATAATATATTGCTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTTTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCACATGTTGTGGGAACTAGGGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGACGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACTGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAATCTCATTGACAAAGATGATGCAGAAGAGAAACTCGGTTTGTTCATTGATCCTAGTCTCGTGGGAAACAGTCAGAAGGTCTATGCAATTCAGCTAGTTAAGCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCAGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGACAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGGTTAAATCGTATAGAGTGTGACGGAGAAATGAAGAGTGAAGAGTGTGACAGAGAGTAG 2463 0.4438 MSNGELFSIEPLELRFPFELKKQISCALQLFNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIMVAMQAQKEAPPDMQCKDKFLLQSVKTFDGASTKDINSEMFNKEAGHLVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNVSSVDFTQASRGFTERSDTQYKYAEARALITRLTEEKSNAIQQNNECHQEPMDSILEVENIGECQNGPLHALGCAGSVEGEEPNGRRGYRIGGDGEGSLSTQAVHVEGDGKSEMVNDDRGLNDELCNDDASEHSGGAQQIDITRRGIETSCHRIMPEINKRDGYGDDEGSMEGRTCANDDDATELSVLSCSNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNATHSTLFRTGKEVIVPLNCSCPTREHDDEYYQAQTTYVLPKDPTYFTTANDTFQGLTTCDSLQRYNPYGVLDLHPGMVLHVPLRCACPTARQAGSGTKYFLTYSVNWGDNVSNIATRKRLEIFFRGDRRGRTKQVFSEQIREGLASIELLSKVYRFDEIKEATENFSASNRIKGSVYRGVFGKERKIMAIKEMNLGASKEVNLLGRINHFNLIKLEDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLGLFIDPSLVGNSQKVYAIQLVKLSLACLVEEPSRRPNMAEVVSSLLRIYTEIETRTSPCRINDSGSTERLNRIECDGEMKSEECDRE 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01436 820 Coils Coil 177 204 - -
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 618 789 - -
Aip01g01436 820 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 337 518 - -
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 529 620 - -
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 529 620 - -
Aip01g01436 820 SUPERFAMILY Protein kinase-like (PK-like) 550 786 IPR011009 -
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 618 789 - -
Aip01g01436 820 MobiDBLite consensus disorder prediction 143 169 - -
Aip01g01436 820 Pfam Protein kinase domain 622 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01436 820 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 337 518 - -
Aip01g01436 820 Pfam MSP (Major sperm protein) domain 8 110 IPR000535 -
Aip01g01436 820 ProSiteProfiles Protein kinase domain profile. 488 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01436 820 Gene3D Immunoglobulins 2 130 IPR013783 -
Aip01g01436 820 Gene3D Transferase(Phosphotransferase) domain 1 613 798 - -
Aip01g01436 820 SUPERFAMILY PapD-like 2 141 IPR008962 -
Aip01g01436 820 MobiDBLite consensus disorder prediction 127 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01436 Aip-Chr1 45594082 45616029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01436 525 781 Receptor kinase-like Gene Family AT2G23770 29.712 7.00e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip01g01436 Pkinase 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01436 - - aip:107606423 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01436 01 45594082 45616029 Aip01g01436 01 45594082 45616029 ECH
Aip01g01436 01 45594082 45616029 Aip05g00431 05 4865081 4868861 PCT