Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01421 ATGGGCCGAAGATGGATAGTAGCGAAGATAGCCCACAACCGCTGCAACAAACAAAAGAAGAGCAAGACAGAACCACTCAGCTCCGAATCACAACGCAAACAAATCATGGGTAAGGTTCACGGATCCCTAGCTCGTGCCGGAAAAGTCAGAGGTCAAACCCCAAAAGTTGCGAAGCAAGACAAGAAGAAGAAGCCACGTGGACGAGCACACAAGCGCATGCAATACAATCGCCGATTCGTCACCGCCGTGGTGGGATTCGGAAAGAAGCGAGGACCAAACTCATCTGAGAATTGCTCTGATCTAAACAAACTAAGAATCGTTCCCCGTGTTTTCCAAATTAGTACGCATTACCCTTGGCAGGAGAGGGATAAGTTTGAACTTTCCAGTTTGCAATAA 396 0.4773 MGRRWIVAKIAHNRCNKQKKSKTEPLSSESQRKQIMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENCSDLNKLRIVPRVFQISTHYPWQERDKFELSSLQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01421 131 MobiDBLite consensus disorder prediction 9 75 - -
Aip01g01421 131 Pfam Ribosomal protein S30 38 94 IPR006846 GO:0003735|GO:0005840|GO:0006412
Aip01g01421 131 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 36 96 - -
Aip01g01421 131 MobiDBLite consensus disorder prediction 57 75 - -
Aip01g01421 131 PANTHER 40S RIBOSOMAL PROTEIN S30 36 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01421 36 96 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.721 1.35e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01421 K02983 - aof:109846097 119.012