Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01416 ATGATGACGATGATGATGCAGGGTGAAAGATTGATGGAAGAAGTAGCAATCATTGGAGGGTTGATCGGTGTGCAGTTTATGGCGGCAGGGAACGCTGTTTTGATGAGCTTTGTTATGTCTTTGGGACTCAAATCTCTCACCATTGTTACATTCATGTCCCCTGCTACATCTCTTTTGCTCTCCCCTCTTGCCTTCTACTCTGAAAGGAGCCTGTGGCCCAAGAAATTCAGTTTCAAGTTGATTTTGCGGTTGATCTTGCTTTCCTTGGGAGGGACAACATTCCAGGTTTTGATGCTGAAAGGAATGAATCTAACCTCACCAGCAATGGGGACTGCCATGCCAAACGTTGCCCCTGGACTTATCTTCATCATTGCTTGGATCTTTCGGTTGGAAAAAGTGAACATAAAATCGACATATAGTAGAGTAAAAATCATGGGGACAATGCTTTGTGTGGTAGGGGCTTTTGCAATGAGCATAATGCAAAGCATGTCCACCAACGCAGCCAAAGGAGATGCAACATTAGTTCATTATATATCAGATCCAACATCAGTTGATGTTGTCTTTGACAAACAGAAGATATTGGGTTGCATCTATCTTCTACTCGCAATTTCTTTATTGTCAAGTTCCCTAGTCTTGCAGGCTTTTATTTTTAGAGATTTTCCGGCACCCATATCGATGTGCGTGATCACATCCTTTTTGGGCACGTTCATAACAGCAGCATTTCAATTCCTTGAAGATCACGAAATCAAAACTGGTTCGGATGTTCTTAGTGCCCGAAACCTCATCATGTATTTTCTTCTGGAAGGTGCAGTAAATGGAGTGTGCATAAGCTTCAGTAGTTGGGCAATAAAGAAGAAAGGGCCAGTTTTGGTGTCCATGTTCAGCCCCATTGGCACCGTATGCTCTGCCATTTTCTCTGTTGTTACCATAGGAGTTACCATCAGTGTTGGAAGCTATGGGGGAATGTTTATAATGTTCACTGGGCTTTACTTTTTCCTTTGGGCTAAAGGGAAAGAAGAAGACATTGAAGGCAGTGGCAAACAAGGTGAATATGATATTGAGAAGCCTCTCTTAGAATGA 1080 0.4259 MMTMMMQGERLMEEVAIIGGLIGVQFMAAGNAVLMSFVMSLGLKSLTIVTFMSPATSLLLSPLAFYSERSLWPKKFSFKLILRLILLSLGGTTFQVLMLKGMNLTSPAMGTAMPNVAPGLIFIIAWIFRLEKVNIKSTYSRVKIMGTMLCVVGAFAMSIMQSMSTNAAKGDATLVHYISDPTSVDVVFDKQKILGCIYLLLAISLLSSSLVLQAFIFRDFPAPISMCVITSFLGTFITAAFQFLEDHEIKTGSDVLSARNLIMYFLLEGAVNGVCISFSSWAIKKKGPVLVSMFSPIGTVCSAIFSVVTIGVTISVGSYGGMFIMFTGLYFFLWAKGKEEDIEGSGKQGEYDIEKPLLE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01416 359 PANTHER OS11G0588100 PROTEIN 14 358 - -
Aip01g01416 359 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Aip01g01416 359 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
Aip01g01416 359 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
Aip01g01416 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01416 Aip-Chr1 44129538 44136335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01416 10 348 Nodulin-like Gene Family AT5G47470 51.603 9.02e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01416 - - gmx:100809182 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01030 05 14874620 14877000 Aip01g01416 01 44129538 44136335 PCT