Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01408 ATGTGTGAGAACGAAGATGCTTGTCAAGAGAATGCCTATACTAGAAATGGATCAAAGAATGTGGATCAGGATACGACTCACAATACTACCGAGAGTGAGTTTTTCTACCGAGACATGGGAGAATTTGGTGACGTTGAAGGGATACATGTGGAAGACATAATGAAGAAGGTATTTAGGACTGATGAGGACGCGTATGAGTTCTATAAGAATTTTGGAAAATATCACGGCTTTGGAGTTAGGAAGGGGGATTCTTGGAAGGATGAGGATGGTATTGTCACAAGGCAGAGATTCTTCTGCAACAGGCAAGGTTTGAGAGATGCAAAGCACTATAATCGGTTAGATAGGATGAGGGTTCACAAACCAGAAACGAGGACTAATTGCGAGGCGAAGTTCTCCATATACCTTGACAAGAGTGCTTCTCTGTGGCGAGTAAGGAAAATTGAAAATAAGCGGATGGTGTCACCAGGCGGAGGTTCTTCTGCAATAGGCAAGGTTTGA 498 0.4317 MCENEDACQENAYTRNGSKNVDQDTTHNTTESEFFYRDMGEFGDVEGIHVEDIMKKVFRTDEDAYEFYKNFGKYHGFGVRKGDSWKDEDGIVTRQRFFCNRQGLRDAKHYNRLDRMRVHKPETRTNCEAKFSIYLDKSASLWRVRKIENKRMVSPGGGSSAIGKV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01408 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 19 152 - -
Aip01g01408 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 152 - -
Aip01g01408 165 Pfam FAR1 DNA-binding domain 66 149 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01408 Aip-Chr1 43823565 43824062 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01408 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01408 - - aip:107615767 188.734