Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01407 ATGAGGGTTCACAAACCAGAAACGAGGACTAATTGCGAGGCGAAGTTCTCCATATACCTTGACAAGAGTGCTTCTCTGTGGCGAGTAAGGAAAATTGAAAATAAGCACAATCATGACTTGACCCCTAGTTGCATGGTGCATTTGATTGTGAAGTATCGGTCACTCACGGATGCTGCCAAAGCTCAGATAGATGGGTTGAACGAGTGTGGAATTTCGACAGCAAAGACTGTACGATATATGGCCGGGATGGCTGGAGGATACTCGTTGGCTGGCTTCTTGAAGAAGGATGCCTATAATCACATTGCTAAAAGAAGGTGTGTAACGATTGCGGAGGGCGATGCAGAAGTTGCGCTTGCATATTTAGAAGGTAAGATAGAATCGGATCCGATGGCCATGGCACGGTACAGTTTGACCGATGAGGGAATGCTAGGTAATATGttttgggccgataggggcagccgagttgattaccagtacttcggggatgtccttgcgttcgatgcgacatacaaaaagaacaagtaTAGGCGGCCATTGGTAATCTTCTTAGGGGCCAACAACCACAAGCAGACCACTATTTTCGGTTTTGGTTTAGTAATGGATGAGACATTTGATTCGTATAAGTGGATATTGCAGAATATGTTGGAGGTGATGTGCATGAAGGAGCCATCAGTGGTTGTTACAGATGGGGATGAGGCGATGCGTAAAGCCATAGCTTTAGTATTTCCGAAGGCCACCCACCGCTTATGTGCATGGCATTTTCAGAAAAATATCACGGCCAACGTGAAGGAGCCATCACTCCGATCACGATTTAACCGATCGTTATATGTGGACATCGAGATTCGTGAATTCTTGACTGAGTGGGATCTAGCGGTTGAAGAGTTCAAACTTCAAGATAGCCTATGGGCGAGGCAGGTGTTTGGTAAGAAGGAAATGTGGGTGAATGTGTATCTGAAGAATAAATTTTGCGCCGGGTTTAGGACCACATCTCAATGCAAAGGTATAAACGCTGTGGTCAAAAATTTCCTTCAATTGAAGCATACTATTCTTGAGCTTGTGCAGAACCTGGAGCTAATGGTACGTGATTATCAGAATAACGAGCTTCTAGCCCAGTTCAGAACCATTGACACTTTCCCAGTAATGACGANNNNCGAAAGAAGTATTTGCAGACGTGAAACGAGAGATTGA 1188 0.4125 MRVHKPETRTNCEAKFSIYLDKSASLWRVRKIENKHNHDLTPSCMVHLIVKYRSLTDAAKAQIDGLNECGISTAKTVRYMAGMAGGYSLAGFLKKDAYNHIAKRRCVTIAEGDAEVALAYLEGKIESDPMAMARYSLTDEGMLGNMFWADRGSRVDYQYFGDVLAFDATYKKNKYRRPLVIFLGANNHKQTTIFGFGLVMDETFDSYKWILQNMLEVMCMKEPSVVVTDGDEAMRKAIALVFPKATHRLCAWHFQKNITANVKEPSLRSRFNRSLYVDIEIREFLTEWDLAVEEFKLQDSLWARQVFGKKEMWVNVYLKNKFCAGFRTTSQCKGINAVVKNFLQLKHTILELVQNLELMVRDYQNNELLAQFRTIDTFPVMTXXERSICRRETRD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01407 395 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 366 IPR031052 GO:0006355
Aip01g01407 395 Pfam FAR1 DNA-binding domain 3 41 IPR004330 -
Aip01g01407 395 PANTHER OS02G0262500 PROTEIN 8 366 - -
Aip01g01407 395 Pfam MULE transposase domain 163 257 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01407 Aip-Chr1 43822345 43823532 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01407 MULE 4.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01407 - - aip:107606218 799.66