Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01400 ATGGGTCAGGAACTTTCTCATGAAGGGGTTAATAGCGAGCATATATCATATGATCACTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGAGTATCACGGCTTCGATGAAAGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGACGAAGATGTATGTCATTTTCACTTTGCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGTGTGCGTACTTAATTTGAAAAATTTTGTATGTCATCGCGAAGAATTTAGACCGCAAAATAATTATGGCATTGGAAACTCTAAGAGAAAACCTACTCCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGtga 534 0.4007 MGQELSHEGVNSEHISYDHYEQEEEKHEEVDVDYMDEDDTNVEPMFEYHGFDERYNIDSLEDIGMIEFWNIRDEDVCHFHFADVNIAFEFYNRYARTRGFSARKNRTRKSRVCVLNLKNFVCHREEFRPQNNYGIGNSKRKPTPETRCGCSAMMEIRLDAPSGRWFISYFSDEHNHP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01400 177 MobiDBLite consensus disorder prediction 1 24 - -
Aip01g01400 177 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 177 - -
Aip01g01400 177 Pfam FAR1 DNA-binding domain 89 177 IPR004330 -
Aip01g01400 177 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01400 Aip-Chr1 43657317 43657850 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01400 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01400 - - aip:110265874 372.474