Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01372 atgaatcaTCTGTATCAGTGTGACAAGACAGGAACACTCACACTTAACAAGCTTAGTGTTGACAAGAACTTGATTGAGGTCTTTACTAAAGGAGTGAACAAGGATCATGTGATCCTTCTCGCCGCAAGAGCTTCCAAGACTGAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGGCAAGGGCTGGAATCAGAAAGGTTTACTTTTTACCTTTCAATCTTGTTGATAAGAGAACTGCTCTGACTTACATTGGCATAGATCAAAGGTTCAATGAGGTGTTCAACAAAGCTATGAATTTCCTCTTAACTTCAAAAAGTGAAGATGCTGATATGAAGCTTATCAATTTCAGTTTATCGGATTTCATCCGGACAGACGAACGACTAAATGACATTTCTGGGAGTGCATATTATGTTGCACCAGAGGTACTTTACAGGTCATATAGTGTGGAAGCAGAAATATGGAACCAGaggtactatggagcaagtaacagagcagtgtaa 522 0.3697 MNHLYQCDKTGTLTLNKLSVDKNLIEVFTKGVNKDHVILLAARASKTENQDAIDAAIVGMLADPKEARAGIRKVYFLPFNLVDKRTALTYIGIDQRFNEVFNKAMNFLLTSKSEDADMKLINFSLSDFIRTDERLNDISGSAYYVAPEVLYRSYSVEAEIWNQRYYGASNRAV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01372 173 PANTHER CALCIUM-TRANSPORTING ATPASE 7 99 - -
Aip01g01372 173 Gene3D - 18 117 IPR023299 GO:0000166
Aip01g01372 173 PANTHER PLASMA MEMBRANE ATPASE 7 99 - -
Aip01g01372 173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 12 91 IPR023299 GO:0000166
Aip01g01372 173 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01372 173 Gene3D - 7 17 IPR023214 -
Aip01g01372 173 SUPERFAMILY Protein kinase-like (PK-like) 103 161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01372 Aip-Chr1 41693191 41694696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01372 7 109 Primary Pumps ATPases AT2G24520 71.845 9.39e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip01g01372 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01372 K01535 - aip:107629531 187.193