Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01370 ATGCCCAACGCCGTCATCTCCGACGAACTCGTCTCTTCAGCCAGCGTCCAGCCTCGTCGTTGCCGATCCTCTTCTCCTGGATCCCATGCTTCTCCTCGCGTCGCTAGGTCTCGTCGCGGAACGgatagagggtgctgtcgccgctgggtggaactgaccgtgCCGCCGCAACCTGCTGTTGCCGCCGCGCAAGACGCTTCCCCCTCCATCACGCAAGACGCTGCCTCAATGCTTGGAGCTACTATTTCAGAGACAAATACACCTTACAAATCAAGGAATCAGAAGGATACAATTGAAGTTGGTCCAGGAAACTTGAAACTGATTTATTCCGAGAAGGAAGAAAAACTCACTGAATACATCAACAGCAAAAGCAAGGAAGTAATGGGTCAGGAATTTTCTCATGAGGGAGTTAGTAGCGAGCATATATCATATGATCAGGATGAGCAGGAGGAAGACATGGAAGAGGAAGTTGACGTGGATTATATGGATGAGGACGACTCAAATGTGGAACCAATGTTCGATTATCACGGCTTTGATGAAGGGTATAACATTGACTCACTCAAAGACATTGGGATGATTGAATTTTGGAACATCAAGGACGAAGATGTATGTCATTTTCACATTTTTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATTGTGAAGGATTTAGACCGCAAAATAATTATGGCATTGAAAACTTTAAGAGAAAACCTACTCCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGCACCTAGTGATCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTTGTTTGACTGGATTGCTTCGTGGGCATAGATTCATGTCCGAGGCTAATATTGGCCACATGATTAACATGAAAAAAGGGTGGAATTAG 1011 0.4283 MPNAVISDELVSSASVQPRRCRSSSPGSHASPRVARSRRGTDRGCCRRWVELTVPPQPAVAAAQDASPSITQDAASMLGATISETNTPYKSRNQKDTIEVGPGNLKLIYSEKEEKLTEYINSKSKEVMGQEFSHEGVSSEHISYDQDEQEEDMEEEVDVDYMDEDDSNVEPMFDYHGFDEGYNIDSLKDIGMIEFWNIKDEDVCHFHIFDVDIAFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFVCHCEGFRPQNNYGIENFKRKPTPETRCGCSAMMEIRLDAPSDRWFISYFSDEHNHPLLDPCLTGLLRGHRFMSEANIGHMINMKKGWN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01370 336 MobiDBLite consensus disorder prediction 1 40 - -
Aip01g01370 336 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 147 318 - -
Aip01g01370 336 MobiDBLite consensus disorder prediction 1 31 - -
Aip01g01370 336 Pfam FAR1 DNA-binding domain 216 306 IPR004330 -
Aip01g01370 336 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 147 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01370 Aip-Chr1 41537329 41542049 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01370 FAR1 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01370 - - ahf:112723376 372.859