Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01356 ATGCAAGGCCATATCATTATCGCTTTCTTAATCGTGCAGAGAATGCCGCCGACCTTCTCCAACCTTGTCCGGGAGACCATGAGCAACCCCATTGAGATAAGCACCACAAATGGTCAGTTGTGGAGCATCTCGTGGGGTGTCGAAGAGGAGTATCTGCATCGAATCGTCTTCACCGGAGGGTGGCGGGACTTTTACGAACACTACCATCTTCGAATCGGTTCCATGCTGCTATTATCGTATCACCAACCAAAGTTTTTCTATGTGGCCATCCATGGCACAAGTTTCTGCGAGATCAATTACAGAAGTCTTCCAGCAAAACCCGCACATGACAACTACACAGTCCAGTTCTACGTGATAATCCCGGTGAACGACCCTGATACACTGATGCTCCCGCCACGGTTCTCGCAGGATTATGGTTGGTTCCTACCGCGACCCTTGACCCTAACCACACCTACAGGACAGCATCATCGCGTGGGCTGGAATATGAAACCTAATGGAAGGATTGTGCTTCATGGAGGATGA 522 0.4981 MQGHIIIAFLIVQRMPPTFSNLVRETMSNPIEISTTNGQLWSISWGVEEEYLHRIVFTGGWRDFYEHYHLRIGSMLLLSYHQPKFFYVAIHGTSFCEINYRSLPAKPAHDNYTVQFYVIIPVNDPDTLMLPPRFSQDYGWFLPRPLTLTTPTGQHHRVGWNMKPNGRIVLHGG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01356 173 PANTHER B3 DOMAIN-CONTAINING 14 101 - -
Aip01g01356 173 SUPERFAMILY DNA-binding pseudobarrel domain 14 101 IPR015300 -
Aip01g01356 173 SUPERFAMILY DNA-binding pseudobarrel domain 112 173 IPR015300 -
Aip01g01356 173 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 101 - -
Aip01g01356 173 Gene3D - 10 96 IPR015300 -
Aip01g01356 173 ProSiteProfiles B3 DNA-binding domain profile. 15 94 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01356 Aip-Chr1 40707508 40708224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01356 14 132 B3 DNA Binding Superfamily AT3G18990 25.210 3.17e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01356 - - aip:110272038 253.447