Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01354 ATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTTCGCATGGATGATGAATTAGAACGTTGGTATGTTGCATACTTTTCAGACGCACATAACCACCACGTACTTGAGTTGCGATTTTCATCCATGCTCCTAGGCCATCGGAGGATGAGCGAAGCGGATATTGAGCAGATGAACGACATGCGCAAAGAGGGCATTGGCGTCTCACGAATTCACGATTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCATACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGACGCGGAATCGTGCTTAAGGTATCTCCGAGAGTGCAAGGCAAATGATTCAGTACTCTACTACAAAGTTGTTGACGGGGAGGGCGTGTTACAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTATTTGGAGACGTGGTTACATTTGATGCAACGTACAAGAAAAATTTTTACCTTTCACCTCTTGTAGTATTGTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTAGTAGCAGACGAGAAAGAAAAGACCTATGTCTGGCTACTTCAACAGTTGCAAACTGCAATGAAAGGGAAGGCTCCTGTGTCCATAATAACCGACGGTGACAGGAAAATGAAGTCTGTGATTGAGCAAGTTTTTCCAGAGGCTCACCATCAACTCTGTGCTTGGCATCTACTTTGA 771 0.4747 MPNRQKRPRAETRCGCPARMLLRMDDELERWYVAYFSDAHNHHVLELRFSSMLLGHRRMSEADIEQMNDMRKEGIGVSRIHDFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKANDSVLYYKVVDGEGVLQHLFWCDGTSQIDYQVFGDVVTFDATYKKNFYLSPLVVLSGVNHHNQTVVFAAALVADEKEKTYVWLLQQLQTAMKGKAPVSIITDGDRKMKSVIEQVFPEAHHQLCAWHLL 256
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01354 256 Pfam MULE transposase domain 164 255 IPR018289 -
Aip01g01354 256 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
Aip01g01354 256 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 255 IPR031052 GO:0006355
Aip01g01354 256 PANTHER OS02G0262500 PROTEIN 4 255 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip01g01354 Aip-Chr1 40678786 40679556 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01354 MULE 9.2e-30 CL0219
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01354 - - ahf:112779874 487.648