LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip01g01354	ATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTTCGCATGGATGATGAATTAGAACGTTGGTATGTTGCATACTTTTCAGACGCACATAACCACCACGTACTTGAGTTGCGATTTTCATCCATGCTCCTAGGCCATCGGAGGATGAGCGAAGCGGATATTGAGCAGATGAACGACATGCGCAAAGAGGGCATTGGCGTCTCACGAATTCACGATTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCATACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGACGCGGAATCGTGCTTAAGGTATCTCCGAGAGTGCAAGGCAAATGATTCAGTACTCTACTACAAAGTTGTTGACGGGGAGGGCGTGTTACAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTATTTGGAGACGTGGTTACATTTGATGCAACGTACAAGAAAAATTTTTACCTTTCACCTCTTGTAGTATTGTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTAGTAGCAGACGAGAAAGAAAAGACCTATGTCTGGCTACTTCAACAGTTGCAAACTGCAATGAAAGGGAAGGCTCCTGTGTCCATAATAACCGACGGTGACAGGAAAATGAAGTCTGTGATTGAGCAAGTTTTTCCAGAGGCTCACCATCAACTCTGTGCTTGGCATCTACTTTGA	771	0.4747	MPNRQKRPRAETRCGCPARMLLRMDDELERWYVAYFSDAHNHHVLELRFSSMLLGHRRMSEADIEQMNDMRKEGIGVSRIHDFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKANDSVLYYKVVDGEGVLQHLFWCDGTSQIDYQVFGDVVTFDATYKKNFYLSPLVVLSGVNHHNQTVVFAAALVADEKEKTYVWLLQQLQTAMKGKAPVSIITDGDRKMKSVIEQVFPEAHHQLCAWHLL	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip01g01354	256	Pfam	MULE transposase domain	164	255	IPR018289	-
	Aip01g01354	256	Pfam	FAR1 DNA-binding domain	4	45	IPR004330	-
	Aip01g01354	256	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	4	255	IPR031052	GO:0006355
	Aip01g01354	256	PANTHER	OS02G0262500 PROTEIN	4	255	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip01g01354	Aip-Chr1	40678786	40679556	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip01g01354		MULE	9.2e-30	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip01g01354	-		-	ahf:112779874	487.648