Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01335 ATGGGAGAATTACAAGGAGGAGAGCCAATTTTAGAAGCATGGAACAAAAAAAAAGAAGAGGAAGAAGAAGAAGAAGCACAAGCCCAATTAGAGATATGGAAATACATTTTTGGGTATGTGGAGTTGGCAGTTATAAAATGTGCCATTGAACTTGGCATAGCTGATGCCATAGAGAGCCATGGAAGTCCCATGACACTCTCCGAAATTTCATCTACTTTAGGCTCTGACCCTTCCCTTCTTAACCGAATCTTGAGATTCTTAATTAACAGAAAGATATTCAAAGCCGATAAAAATTCAGATTCCACTACCACTTATGCCAACACGCCGTTATCTCGCCGTTTCCTGAAAAACGGGCAGCAAAGCATGGCGGCGTTCCTCCTCCTGGAGAGCAGCCCGGTCATGCTTGCACCTTGGCACAGCCTAAGCGCCCGTGTTTTGGCAAACGGTGGAATAAACTTCCCCTTCCAGAAGGCACACGGCGAAGACGTGTGGGGCTACGCCGCGGAGAATCCGGGTCACAGCAACCTTATAAACGAGGCAATGGCGTGCAGTGCTAAGATGGTGGTGCCTGCCATTGTTGAAGGTTGTGGCGACGAGGTGTTCGAAGGCTTGAAAACGTTGGTGGATGTTGGTGGTGGAACCGGCACCGCGTTGCGCGCTTTGGTTAAGGCTTGTCCTTGGATTCATGGAATCAATTTTGATCTTGCTCATGTCATTGCTGTGGCTCCCAAGATTGAAGGAGTCGAAAATGTGGCTGGTGACATGTTTCTAGGTGTTCCCAAAGCTGATGCTGCTTTTCTTATGTGGGTTTTGCATGATTGGGGTGATGAGGAGTGCATCCAGATCTTGAAGAAGTGCAAGGAAGCCATTCCAAAGGAAAATGGAAAAGTGATCATTGTGGAGGCAGTGATTGAAGAGGGAGCAATAAAGCAAGGAAATTTAAAGGACGTAGGGTTGATGTTGGATATGGTAATGATGGCGCACACAAGCTTCGGGAAAGAGAGGACACTCAAAGAGTGGGAATATGTTATCAAAACGGCTGGATTTACTTCATACACTGTGAAAAGCATCGATGCTGTGCAATCTGTGATGTTAGCCTACCCATGA 1107 0.4661 MGELQGGEPILEAWNKKKEEEEEEEAQAQLEIWKYIFGYVELAVIKCAIELGIADAIESHGSPMTLSEISSTLGSDPSLLNRILRFLINRKIFKADKNSDSTTTYANTPLSRRFLKNGQQSMAAFLLLESSPVMLAPWHSLSARVLANGGINFPFQKAHGEDVWGYAAENPGHSNLINEAMACSAKMVVPAIVEGCGDEVFEGLKTLVDVGGGTGTALRALVKACPWIHGINFDLAHVIAVAPKIEGVENVAGDMFLGVPKADAAFLMWVLHDWGDEECIQILKKCKEAIPKENGKVIIVEAVIEEGAIKQGNLKDVGLMLDMVMMAHTSFGKERTLKEWEYVIKTAGFTSYTVKSIDAVQSVMLAYP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01335 368 Pfam O-methyltransferase domain 138 349 IPR001077 GO:0008171
Aip01g01335 368 Pfam Dimerisation domain 44 87 IPR012967 GO:0046983
Aip01g01335 368 CDD AdoMet_MTases 206 300 - -
Aip01g01335 368 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 17 367 - -
Aip01g01335 368 PIRSF O-mtase 10 368 IPR016461 GO:0008168
Aip01g01335 368 Gene3D - 14 114 IPR036388 -
Aip01g01335 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 366 IPR029063 -
Aip01g01335 368 Coils Coil 11 31 - -
Aip01g01335 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 368 IPR016461 GO:0008168
Aip01g01335 368 Gene3D Vaccinia Virus protein VP39 116 367 IPR029063 -
Aip01g01335 368 PANTHER O-METHYLTRANSFERASE 17 367 IPR016461 GO:0008168
Aip01g01335 368 SUPERFAMILY "Winged helix" DNA-binding domain 22 118 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01335 Aip-Chr1 39590402 39592054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01335 45 354 Monolignol Biosynthesis Gene Families AT5G54160 38.245 2.04e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01335 K22588 - gmx:100782951 478.018