Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01314 ATGACATGTAAGAAAATTGATGCTAATAAAGCTTCTAATGAGGGGAAGCCACCACAAAGAGTGAGAAGAATAGGCAACTATGATACACTGGGAACAGAACTTCTGGAGAGTTTGTTGAAGATGGCTCCAACCAAAGAAGAAGAAACTAAGCTGAGGGAGTTCCAAGACGAATATCCCTTCAAGCTTGGTCCTACTAAAAAATTTCTTAAGATCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGAAGCTATACTCTACATTGCTAATTTTGATTCTGAATTGGAATACCTTAAAAGTCCTTTGAGACTCTGGAGGGAAGCCATCGTTTACAATAACGGGCACCTCCACAAAGCTAGATCTAGTAGGAGGAATAAGAAGAGTGGGTTGGAATATGATGAGATTAAGAAGCACTTCGATTTGTCAATCACAAAAGCTGCTAGCATGATGAACTTTTGCTGGTCTCGTAGAAAAATCAAAAGCTTGCATTTACTCGTACAAAATCTCGAGGAGATGGGTCTAGATAATAAAAGTTGGAGTGTCAGAACAAAAAACAAATATGTTGGAGCAAGTTCTAGGGATAGAACTCACACAAGAGACCAAGAATTAAGGCATGCTTGTTTTAAAGCTAATTACAGAAGGAGAAAATTTTTGGCGTTCAAATCTTATTCATCATGA 678 0.3776 MTCKKIDANKASNEGKPPQRVRRIGNYDTLGTELLESLLKMAPTKEEETKLREFQDEYPFKLGPTKKFLKIMLDIPFAFKRVEAILYIANFDSELEYLKSPLRLWREAIVYNNGHLHKARSSRRNKKSGLEYDEIKKHFDLSITKAASMMNFCWSRRKIKSLHLLVQNLEEMGLDNKSWSVRTKNKYVGASSRDRTHTRDQELRHACFKANYRRRKFLAFKSYSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01314 225 Pfam Formin Homology 2 Domain 23 109 IPR015425 -
Aip01g01314 225 Gene3D Formin, FH2 domain 10 128 IPR042201 -
Aip01g01314 225 PANTHER FORMIN-LIKE PROTEIN 1 25 100 - -
Aip01g01314 225 SUPERFAMILY Formin homology 2 domain (FH2 domain) 25 109 - -
Aip01g01314 225 MobiDBLite consensus disorder prediction 1 21 - -
Aip01g01314 225 PANTHER FORMIN-RELATED 25 100 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01314 Aip-Chr1 38902251 38904102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01314 25 99 FH2 protein (formin) Gene Family AT3G25500 76.000 3.18e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01314 - - adu:107480832 141.354