Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01312 ATGGAGGAACGCTACGAGCCACTGAAGGAGCTTGGTTCTGGCAATTTCGGTGTTGCAAGGTTGGCCAAGAACAAGAAAACTGGGGAGCTTGTTGCGGTCAAATACATAGAGAGAGGCAAGAAGATTGATGAGAAGGTTCAGAGGGAGATAATCAATCACAGGTCTTTAAGGCATCCCAATATCATTAGATTCAAAGAGGTGCTGCTGACCCCTACGCATTTAGCTATTGTCCTGGAGTATGCTTCAGGTGGTGAACTCTTTGAGAGGATATGCACCGCTGGTCGATTTAGTGAAGATGAGGCGAGATATTTCTTCCAACAGCTGATTTCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACCCTCTTGGATGGAAATCCGTCTCCCCGACTTAAAATTTGTGACTTCGGTTACTCGAAGTCGGCTTTACTGCACTCTCAACCAAAATCAACAGTTGGAACTCCAGCATACATTGCTCCGGAGGTTCTGTCACGAAAGGAGTACGACGGAAAGATTGCAGATGTTTGGTCCTGTGGTGTGACCCTTTATGTCATGTTAGTTGGTGCATACCCTTTTGAGGATCCGGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGTGTTCAATACTCCATACCAGACTATGTTCGCGTTTCTGCAGAGTGTAGGAACCTTCTCTCTCGAATCTTTGTTGCCGACCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAACCCTTGGTTTCTGAAGAAGTTGCCTAGAGAGACCATGGAAGCTGAAAGAAAAGGTGGAGAGGATACACAGAAAGACCAACCAAGGCAGTGCGTCGAAGAGATTATGCGGATCATACAAGAGGCTAGAACACCAGGGCCAATGTCTAAGGCTAGTGATGTGGGCCAAACTGGCACTGGATCACTTGATGATGAAGATGATGAAGTTGATGTTAGCGGTGACTTTGAACATGTTTGA 1008 0.4524 MEERYEPLKELGSGNFGVARLAKNKKTGELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIPEIKQNPWFLKKLPRETMEAERKGGEDTQKDQPRQCVEEIMRIIQEARTPGPMSKASDVGQTGTGSLDDEDDEVDVSGDFEHV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01312 335 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Aip01g01312 335 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Aip01g01312 335 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 329 - -
Aip01g01312 335 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01312 335 MobiDBLite consensus disorder prediction 297 335 - -
Aip01g01312 335 CDD STKc_SnRK2 4 260 - -
Aip01g01312 335 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Aip01g01312 335 PANTHER SERINE/THREONINE KINASE 3 329 - -
Aip01g01312 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Aip01g01312 335 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Aip01g01312 335 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01312 335 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01312 Aip-Chr1 38533420 38537042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01312 4 306 CBL-interacting serine-threonine protein kinases AT4G24400 41.720 2.46e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip01g01312 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01312 K14498 - gmx:100817713 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01312 01 38533420 38537042 Aip01g01312 01 38533420 38537042 ECH
Aip05g00444 05 5004518 5006334 Aip01g01312 01 38533420 38537042 PCT