Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01300 ATGGTGATGGTGGCGAGGAGAAGCTGGCGCGGTGCTCCTGGGCTGGCAGAGATCCGCGACGTTGCTAGCAGAGAAGGCGCCCAACTGGAATTAGGGTTTCTTTGGCTATTCCACTCGTTCCCTACTGCAGAAGCTCTCAGCTACTTCGATCCCGTAACCATGACTAAGAGAACGAAGAAGGCTGGTATTGTTGGAAAATACGGTACCCGTTATGGAGCTAGTCTGCGTAAGCAGATTAAGAAGATGGAAGTTAGTCAACACAGCAAATTTTTCTGTGAATTTTGCGGAAAGTATGCCGTGAAGAGGAAGGCTGTAGGAATATGGGGATGCAAGGACTGTGGTAAAGTGAAAGCTGGTGGCGCCTACACTTTGAATACCGCGAGTGCCGTGACCGTGCGGAGCACAATTAGAAGGTTGAGGGAACAAACTGAGAGTTAA 438 0.4977 MVMVARRSWRGAPGLAEIRDVASREGAQLELGFLWLFHSFPTAEALSYFDPVTMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01300 145 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 49 145 - -
Aip01g01300 145 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 57 125 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip01g01300 145 Gene3D - 54 145 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aip01g01300 145 SUPERFAMILY Zn-binding ribosomal proteins 63 135 IPR011332 GO:0006412
Aip01g01300 145 TIGRFAM eL43_euk_arch: ribosomal protein eL43 54 144 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip01g01300 145 Pfam Ribosomal L37ae protein family 57 141 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip01g01300 145 PANTHER ZGC:171772 49 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01300 Aip-Chr1 37381520 37385349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01300 54 145 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.478 1.06e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01300 K02921 - csin:114301577 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01300 01 37381520 37385349 Aip01g01300 01 37381520 37385349 ECH