Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01288 ATGAACTGTTTGTTCTTCAAGGAGAAGCGCAAGGAGAAGTGCAGGTCGGCACCGGAGCTGGAGCAGCAGAATCGAGGAGGGGCGAAGAAGAAGGATCCGGCTTTGAACCGCGCCACGAACTCCACCGGCTCCATACAATCGCCGAGGAGCGTGAAGGAATTGTACAAGGAGAAAGAGAAAGAGAGCAATTTCAGGGTTTTCACGTGGCAGGAGCTGAAAGATGCTACAAGCGGTTTCAACAAGATGCTCAAGATTGGCGAGGGAGGGTTTGGGAGTGTGTATAGAGGTTCCATTAGTCCTCCAGATGGAAAAGGTGAACCGATTGTTGTTGCCATCAAGAAGCTTAACCCACGTGGCTTCCAGGGTCATAAAGAATGGCTTGCGGAAGTTCAATTTCTAAGCATTGTTAGTCACCCAAATCTGGTTAAGCTTTTGGGATACTGCTCTGTGGACGGTGAAAGAGGGATCCAGCGGCTGTTGGTGTACGAGTTCATGCCCAACAGAAGCCTTGAAGATCACCTCTTCAGTAAAACTTTACCCCCTCTTACTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCGTATCTACATGAGGGGCTAGAGATTCAGGTGATATACCGAGATTTCAAGTCATCAAATGTTCTATTAGATGAGAATTTCCACCCAAAGCTTTCAGATTTCGGTCTTGCTAGGGAAGGTCCCCAAGGTGACCATACTCATGTCTCTACTGCAGTAGTTGGTACTCAGGGATATGCTGCTCCAGAGTACATTGAAACAGGTCACCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGCGTTGTCCTCTACGAGATCATTACTGGAAGGCGATCGCTAGAAAGAAACCGTCCTACGCCGGAACAAAAGCTACTAGATTGGGTTAAACAACACCCTGCTGATAGCAACAGGTTCACAATGATAATCGATCCCCGTCTGAGGAACCAATATTCCCTCCCTGCGGCTCGCAAGGTAGCCAAGTTGGCCGACAGCTGCTTAAAGAAGAATCCTGAAGATAGACCAGCCATGAATCAAATAGTTGAGAGCCTGAAGCATGCATTGCAAATTTCAGAAATGACGAGCAGTTCGAGCAATGTTGGCGAATCGTCACGATCGAAATTGGGCCGAAAAGGTAAATAG 1170 0.4752 MNCLFFKEKRKEKCRSAPELEQQNRGGAKKKDPALNRATNSTGSIQSPRSVKELYKEKEKESNFRVFTWQELKDATSGFNKMLKIGEGGFGSVYRGSISPPDGKGEPIVVAIKKLNPRGFQGHKEWLAEVQFLSIVSHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFSKTLPPLTWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHPKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEIITGRRSLERNRPTPEQKLLDWVKQHPADSNRFTMIIDPRLRNQYSLPAARKVAKLADSCLKKNPEDRPAMNQIVESLKHALQISEMTSSSSNVGESSRSKLGRKGK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01288 389 MobiDBLite consensus disorder prediction 14 32 - -
Aip01g01288 389 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Aip01g01288 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Aip01g01288 389 Gene3D Transferase(Phosphotransferase) domain 1 165 383 - -
Aip01g01288 389 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 24 383 - -
Aip01g01288 389 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Aip01g01288 389 MobiDBLite consensus disorder prediction 14 51 - -
Aip01g01288 389 MobiDBLite consensus disorder prediction 367 381 - -
Aip01g01288 389 PANTHER OS01G0588500 PROTEIN-RELATED 24 383 - -
Aip01g01288 389 Pfam Protein tyrosine and serine/threonine kinase 83 360 IPR001245 GO:0004672|GO:0006468
Aip01g01288 389 CDD STKc_IRAK 85 361 - -
Aip01g01288 389 Gene3D Phosphorylase Kinase; domain 1 50 164 - -
Aip01g01288 389 MobiDBLite consensus disorder prediction 367 389 - -
Aip01g01288 389 ProSiteProfiles Protein kinase domain profile. 79 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01288 389 MobiDBLite consensus disorder prediction 35 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01288 Aip-Chr1 36778621 36781758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01288 1 360 Glycoside Hydrolase AT3G07070 42.120 2.23e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip01g01288 PK_Tyr_Ser-Thr 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01288 - K00924 adu:107483795 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01288 01 36778621 36781758 Aip01g01288 01 36778621 36781758 ECH
Aip05g00454 05 5088845 5091183 Aip01g01288 01 36778621 36781758 PCT