Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01287 ATGTGGGTTTGCTTAAGAGAAAATTGTGTAATAGATGATGCTACTGGCTTGGGTTTCCATGCTAAAAGCTGCCCAAAAGCTGAGAAGATTGTTTCTGATTTTGTGAATGAGCACATCCACAAAGCTCCTTCACTTGCAGCTGTATTAATAACAATGCATTTTCATGATTGTTTTATCAGGGGGTGTGATGGATCAGTGCTTTTGAACAACACAAACAAGCAAGTTGAGAAGAATGCTTCACCAAACTTGACAGTGAGAGGGTTTGACTTTATTGAGGGAATAAAGAGCCTTGTGGAAGCTGCATGCCCTGGTGTTGTTTCTTGTGCTAATATCTTAACTTTGGCTACCAGAGACTCTATTGTTGCCACTGGTGGACTCTTTTGGCAAGTTCCAACAGGTAGAAGGGATGGTTTAGTTTCTAATTTGTCAGAATCCACAAGAAACATTCCTACTCCATTTGATAACTTCACCACCCTGCAAACTAAGTTTAATAATGCTAGACTTGATCTCAATGACTTAGTCATCCTATCTGGCAAAATGCCATTCAGTTAG 552 0.3986 MWVCLRENCVIDDATGLGFHAKSCPKAEKIVSDFVNEHIHKAPSLAAVLITMHFHDCFIRGCDGSVLLNNTNKQVEKNASPNLTVRGFDFIEGIKSLVEAACPGVVSCANILTLATRDSIVATGGLFWQVPTGRRDGLVSNLSESTRNIPTPFDNFTTLQTKFNNARLDLNDLVILSGKMPFS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01287 183 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PANTHER PEROXIDASE 16 179 - -
Aip01g01287 183 Gene3D - 16 167 - -
Aip01g01287 183 Pfam Peroxidase 32 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 ProSiteProfiles Plant heme peroxidase family profile. 14 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 SUPERFAMILY Heme-dependent peroxidases 17 178 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PRINTS Haem peroxidase superfamily signature 172 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01287 183 PANTHER PEROXIDASE 25-RELATED 16 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01287 Aip-Chr1 36752754 36753570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01287 17 178 Peroxidase AT4G11290 67.683 2.89e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01287 K00430 - gmx:100803114 260.766