Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01284 ATGTCAGATATATTTTTGGACACTGAGATGGATGAGCAATACCAGGAGGACGATGACATTAACCAACAAGAAGAGCTAGTTTGTGACCAAAATATGATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATGAATTTACTGAGGGAGCGTATTTTTCTGAATCTGATCAGTCAGAAGATACCCTTGAAGCTGTTTATGCGGTTGACTCTGTACAAGACATTACAACTTTGAATTTCAGTGAAAACTGTGCAGAGGAAATTGGTAAATATTACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGTAAGACTTTCAAAAATAGTATTGGTGAGATTTACAAACCAAAGTTTTTATGTCATAGGCAAGGATTCAGGGAGAAAAAATATTACGCGATGGAAAAAAGGAAGAAGGAACCTAGATTGGAAACAAGAACTGGGTGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAATTGGAAGATGGCATATCTTTTATTTCTCTGACAAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGCTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCCGAGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATAAATTTGTTGGCTATGGTCCCAAAGATATGTACAATGAGATTTCTCGGCAAAGGCGTCAAATTTCTGGTGATGCATCACGAGTGTTGAAGAAGTTGGAGGATATCCGGTTGAAGGATCCACAATTATATTTCAAGGTATGTCATGATTCAAGAGGTTTGTTATGTAACTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCAACTCTTTAGGGATGTTATTGCTTTTGATGCTACGTATAAGAAGAACAACTCATGTTTGCAATTGAAGGGTAAAACCCCGACCTCAATAATAACTGATGGGGCCATGGCGATTAGGAATGTGGTAAGAGATGTTTTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACTTTATTCGAAATGCAATTAGCAATGTTGGAAATCCATCGTTTACATCTAAATTCAGAAAAATCATGTTAGGAGCCTATGAGATTCCCATGTTTAAGCATAAGTGGGTTCAGCTTATTGAAGAATTTGGCCTTGAGGATAAGCAATGGGTGAACAACATGTATGAAGAGAAGCATATGTGGGCTATTGCATATATAAGAGGAAAATTTTTTGCTGGCTTTAGAACTACCTCAAGATGTGAAGGTTTACACTCAGTTGTGGCAAGAGACATTTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTGAAACCAGCACTCAATGATGCAAGTGGGTTGACCAGGGATGCTGTTGTTATTGGTCGTCAAAGTGCCTTGATGGAATTTTCTAAACAATTGGCTGCTGTTGCTGCTGAAGTGCCAAAGAGATATGAAGAGACACGTGACATAATTATGGGATTGCACTCATCTTACAAAGATACAGACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAACCAATATAGGCTCAAGACAACCATCTAAGAAGAAGCGGCAGCATTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAGATGAAGCTAATGGTTCAGATGATGCGACATGCTTGCGTGTGGAAGCACCATCGCGTGTGGAAGCTCCGTCGTCGTCTCCTCTGTTCGAGAGCTCTCTCTTTGTGTTCACGTGTGGAGGCTCTGTCGCCGTCGCATTAAAGCTCTGTCTCCGTCGCGTGAAAGCTTTGTTCGAGCTCTCCCTCTCTCCGTCTTCACTGTTGTCTGTCTCTCGCTGCTGGGTTACTGGTTTGCTTGAAAGTAATGAAAGTAGGGACATAAAGATGATTTTGAATAGAGTTAAGACAGATATGATTAAGGGTGAGGACATGATGTCTGTTCTTGATGTACAAGTTCTTTGGCAATGTGGCTGA 2115 0.4052 MSDIFLDTEMDEQYQEDDDINQQEELVCDQNMMDEQNEFEQDFGDEFTEGAYFSESDQSEDTLEAVYAVDSVQDITTLNFSENCAEEIGKYYFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKPKFLCHRQGFREKKYYAMEKRKKEPRLETRTGCEARMDVKFVPEIGRWHIFYFSDKHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSEISTSQIFGLLASQAGGYKFVGYGPKDMYNEISRQRRQISGDASRVLKKLEDIRLKDPQLYFKVCHDSRGLLCNLFWSDGISQLDYQLFRDVIAFDATYKKNNSCLQLKGKTPTSIITDGAMAIRNVVRDVFPEVRHRLCAWHFIRNAISNVGNPSFTSKFRKIMLGAYEIPMFKHKWVQLIEEFGLEDKQWVNNMYEEKHMWAIAYIRGKFFAGFRTTSRCEGLHSVVARDICEIPRSLVLDRWTKKVKPALNDASGLTRDAVVIGRQSALMEFSKQLAAVAAEVPKRYEETRDIIMGLHSSYKDTDEGTNQPQSGVAKSSNPYVHQTNIGSRQPSKKKRQHCSVCQMEGHKKTTCPWQKDIDNNVIEDEANGSDDATCLRVEAPSRVEAPSSSPLFESSLFVFTCGGSVAVALKLCLRRVKALFELSLSPSSLLSVSRCWVTGLLESNESRDIKMILNRVKTDMIKGEDMMSVLDVQVLWQCG 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01284 704 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 330 450 IPR031052 GO:0006355
Aip01g01284 704 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 322 IPR031052 GO:0006355
Aip01g01284 704 MobiDBLite consensus disorder prediction 524 552 - -
Aip01g01284 704 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Aip01g01284 704 MobiDBLite consensus disorder prediction 522 560 - -
Aip01g01284 704 Pfam MULE transposase domain 328 366 IPR018289 -
Aip01g01284 704 PANTHER OS02G0262500 PROTEIN 330 450 - -
Aip01g01284 704 PANTHER OS02G0262500 PROTEIN 90 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01284 Aip-Chr1 36701969 36705331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01284 FAR1 2.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01284 - - ahf:112728364 833.172