Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01282 ATGGAGCCGTCAGATAGCGATTTTTTTGGAACAGACTCTGATGTGGAGTTCCCAGGAGGAAATGATCTAGATTTTTTAGACGATGATTCAAAGGCTTATGAAGATAGACCTCAAGATAAGAGAATAGCAGACCTGTCACGAGAAGAAATCATGCAACTTCATTTTACAGATGAGGAAGCTGTTTATCGATTTTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTTAGACGCGATAGCGATGGTTGTGTAATTATGCGCCAAATTATTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGCTGATAGGACTAGCCATATTAATTATGGGTGCTTTGGGGATGTCTTGCAATTTGATTCGACTTACAATAGGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATAATGGCCAGACCGTCATATTTGGATGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAATAAACACCCTATGGCAGTTGTCACTGATGGAGATCTTTCAATGAGAGAAGATATTAAACAGGTCTTTCCTTATGCAACACATCGACTATGTGCATAG 627 0.4035 MEPSDSDFFGTDSDVEFPGGNDLDFLDDDSKAYEDRPQDKRIADLSREEIMQLHFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGCVIMRQIICNRAGSRKEEADRTSHINYGCFGDVLQFDSTYNRNVYNKPLVIFSGSNHNGQTVIFGCGLLVNEDIGSYKWLLETFLEAMGNKHPMAVVTDGDLSMREDIKQVFPYATHRLCA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01282 208 Pfam MULE transposase domain 120 207 IPR018289 -
Aip01g01282 208 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 207 IPR031052 GO:0006355
Aip01g01282 208 MobiDBLite consensus disorder prediction 24 39 - -
Aip01g01282 208 Pfam FAR1 DNA-binding domain 63 109 IPR004330 -
Aip01g01282 208 MobiDBLite consensus disorder prediction 1 39 - -
Aip01g01282 208 PANTHER OS02G0262500 PROTEIN 106 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01282 Aip-Chr1 36546201 36547290 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01282 MULE 1.7e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01282 - - aip:107641230 195.282