Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01275 ATGAATTTGCAGAACTCACACTCGAACTGTTCGTTGTCGTTCGTCTCACCATTGCCGCTTGGTCGTCTCACCGTTGCCGCTTGGTTTGTGGTGGTTGTTTGTCGATCCTCCTGGTTTGTTGTGCTTGAAGGTCTTCCCCTCGTTCACCCAACGACAACGTCTCCAAGTCTTGCTCCGCAGCTCTTCACTCGTTGTCCGTCCGTAGTGTTTGTCGCCAACTCGCCAGTTTTCGTCGCCACCTTTCGGTCGTCCGTCGATCTCCCTCAAATCTCTGCTACCTTCCCTCGCCGAAGAGAACCCTTTCAGAGAAGAAATTTTTACCCAAACCTCCAAAGCACGAAGAAAACCCTCACCATCGCAAAGATCGAAACCCGCCGTCTCACTATCGTCGCACCCCAGTCACCACTCACCCCCACTCACCAGTCACCGCCACACACGACTCACCACTCACCACTGACCACTGACCGTCGCTCCTCTTCGCCTTCCTGCTCTGATCGTCGCTGTGCCGCCATACCATCGTCGATCTCTGCGCTTCTCGTCGTCCTCTCTGTGCTCACGGCGTCGATTAGTGTTAGTGTGGTGAGATCACACACAGAAGGCCCTAGAATCTATTCTATAGGAATCCCTCCATCTAACATTGGTGAAAAATTTGGTCAACTACTGAAAAGCGGAAGAGGAACTGATGTTAGTTTTGAAGTGAATGGAGAAATTTTTGCGGCCCATAAATTGGTACTAGCTGCACGGTCACCCGTTTTCAGAGCCCAAATTTGTGGTCCTGTGAAAGATCAGAATACTGATTGTATAAACACTGGCTACAACTTTAGCATTAGCAGAGCAGCATTGTTGTTTTCAGCTGAAAGCAGTCTGTCTCAAGTTTATTGCAACCTCCGAAAACCTCAGAGGATTTCTAAGGCTACAATAAATGAGTATTTAGAGAAGATTGATGCCATTGCATCCAAACTACTTAACTTTGAGTGCTGTCGCCAGAGCTGCTTCTTCTCTCCGTCGCACGAGCTTCTTCTGCCGCTGCTCACATTGCACGATATCTCTCTGTCATCCCTTCCGTTGCACGAGCTTCCTCTGTCGCCGCTCTCACCGCGTCTGCTCCCTTCGTCGCTATCGTCGCAGAGCTCTCTCTGCCACTCTCGTCGCATTTGCTCCCTTCATCTCCGACGTCGTAGAGCTCTCTCTGCCGCTGCTCTCATCGCGTCTGCTCCCTTTAAGAGCATTGAGTGTGATCAATTAGAATATAGTGCAAGGTACATGCCTATGCCTCTCATTTTGGAGCCTTCTGCTTCTGAGTTCGTCAAGCTTCAAAAACCCCAACACTCAGATTTGGGATTGTCGAAGTTACTTTGGATAGGCCTAAAATTAAGAATGCCATAG 1386 0.4957 MNLQNSHSNCSLSFVSPLPLGRLTVAAWFVVVVCRSSWFVVLEGLPLVHPTTTSPSLAPQLFTRCPSVVFVANSPVFVATFRSSVDLPQISATFPRRREPFQRRNFYPNLQSTKKTLTIAKIETRRLTIVAPQSPLTPTHQSPPHTTHHSPLTTDRRSSSPSCSDRRCAAIPSSISALLVVLSVLTASISVSVVRSHTEGPRIYSIGIPPSNIGEKFGQLLKSGRGTDVSFEVNGEIFAAHKLVLAARSPVFRAQICGPVKDQNTDCINTGYNFSISRAALLFSAESSLSQVYCNLRKPQRISKATINEYLEKIDAIASKLLNFECCRQSCFFSPSHELLLPLLTLHDISLSSLPLHELPLSPLSPRLLPSSLSSQSSLCHSRRICSLHLRRRRALSAAALIASAPFKSIECDQLEYSARYMPMPLILEPSASEFVKLQKPQHSDLGLSKLLWIGLKLRMP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01275 461 SUPERFAMILY POZ domain 204 269 IPR011333 -
Aip01g01275 461 Pfam BTB/POZ domain 218 270 IPR000210 GO:0005515
Aip01g01275 461 MobiDBLite consensus disorder prediction 131 165 - -
Aip01g01275 461 Gene3D Potassium Channel Kv1.1; Chain A 195 312 IPR011333 -
Aip01g01275 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 182 270 IPR045005 GO:0016567
Aip01g01275 461 ProSiteProfiles BTB domain profile. 227 254 IPR000210 GO:0005515
Aip01g01275 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 182 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01275 Aip-Chr1 35844061 35851153 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip01g01275 BTB 2.5e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01275 K10523 - aip:107636513 209.92