Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01266 ATGTTCCAATTCAAAGAACTCCAAGTTACTACCAATAACTTCAACAATAAGAACATTCTTAGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCTGGTAGCACTCTTGTAGCTGTCAAGAGGCTGAAAGATGGCAATGCCATTAGAGGAGAGATTCAATTTCAGACTGAAATCAAAATGATCAGCCTCGCCATCCACCGGAATCTCCTCGGACTCTATGGATTCTGCATGACACCAACAGAAAGGCTTTTAGTTTACCTTTACATGTCCAATGGCAGCATCGCTGCACATCTGAAGAGTAATATCAATCGTAGAATTTCATATGAAGTTGACATTTAG 345 0.4 MFQFKELQVTTNNFNNKNILRKGGFGNVYKGVLSGSTLVAVKRLKDGNAIRGEIQFQTEIKMISLAIHRNLLGLYGFCMTPTERLLVYLYMSNGSIAAHLKSNINRRISYEVDI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01266 114 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Aip01g01266 114 PANTHER PROTEIN NSP-INTERACTING KINASE 1 2 102 - -
Aip01g01266 114 PANTHER OS01G0253100 PROTEIN 2 102 IPR045271 GO:0004714|GO:0006468
Aip01g01266 114 ProSiteProfiles Protein kinase domain profile. 14 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01266 114 Pfam Protein tyrosine and serine/threonine kinase 17 109 IPR001245 GO:0004672|GO:0006468
Aip01g01266 114 SUPERFAMILY Protein kinase-like (PK-like) 4 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01266 Aip-Chr1 35315498 35315842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01266 2 109 Receptor kinase-like Gene Family AT5G16000 65.789 3.95e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip01g01266 PK_Tyr_Ser-Thr 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01266 - - ahf:112710653 174.866