Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01236 ATGAATTGGAAAAAATCTGAAAAGAAGGGTTGGAGTGAAATTAACAAAGGCCGCCTCCTACTCCAATTCAAAAACCACCTAACCGACCTTGACAACTCACTCTCTTCATGGAACCCTTCAGACACAACCCCGTGCCATTGGTGGGGTGTCACATGCCGCAACGCCACTACAACTCCCGTAACCGTCACCATCACCTCTCTCAACCTCCCCTCTACCACTCTCAACGGCCACCTGCAATCCCTCTCCGTTTGCTGCCGTCTCCGTCACCTCGACCTCTCCCAAAACACTCTTGTTGGAACCATTCCCTTCTCCCTCTCCCTCCTCACCGCCCTCCGCCACCTCGACCTCTTCTTCAACAACCTCTCCAGCAACATCCCCACTCAACTCAGCCACACTCTTCACCGCCTCGTGTTACTTGACTTAGTCAACAACTTCCTCAGCGGACCATTCCCGAACTCGTTAACTAACATGACGTCACTCAAGTTGGGTACTCTTGATTTGAGCTATAATGAAATGTCTGGTGAAATTCTGGGTTGGATTAGCGGTTTGAATAGACTCAATGAGCTTAATTTGCACATAATAGGAAACCCTGAGCTTTGTGTTAAAGGATTTGGGAAATGTCATAGCTCAAGGGGTAGAAAGTACCGGAGGTATGCATGGATTTTCAGGTCGATATTTGCAGTTGCTAGAATCTTGTTCATCCTTGGGGTGGCTGTGTTTTATGTGAGATACAGGAACTTAAGAAAGAAGAAGAGAAGTTTAAATGTTTCAAAGTGGAGGTCGTTTCATAAGCTAGGCTTTGATGAGTTTGAGATTGTGAAATTGATGAGTGAAGACAATGTGATAGGGAGTAGATCATCTGGGAAGGTTTACAAGGTTGTTCTAAGCAGTGGTGCTGTTGTGGCCGTCAAGAAATTATGGAGAGAAACCAAGGATGGAATTGGGATTGTTGGTTCTGAAAAAGATGAATTTGATGTTGAAGTTGAAACACTAGGAAAAATAAGGCACAAAAATATAGTAAGGTTGTGGAGTTGCTACAACAGTGGTGACAGCAGGCTCCTGCTTTATGAATATATACCGAATGGGAACTTGGCCGATATGTTGAAGAGTAACAAGAAAAGCTTGTTGGATTGGCCAACAAGGTCCAAGATTGCAATTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGGTATTGTGCCATTCATTGTTCATAGGGATGTAAAATCGAACAACATATTGCTCGACAGTGAGTTTGGAGCAAAAGTGGCTGATTTTGGAGTTGCCAAAATTGTTAATAGAACTAGCCAAGGGGCGGTGTCCATGTCTGTAATTGCAGGCTCTTATGGTTACATTGCACCAGAATATGCATATACTCTTCGGGTGAACGAAATGAGTGATATTTACAGCTTTGGTGTTGTCATTTTGGAGTTAGTAACCGAAAAACCTTCTAATCATGCAGATTACGGGGAAAATGATCTGGTAAAATGGGTCTCATCCTTGTTGGAACAGAAAGGAATGGATCTTGTGATTGATCCTGCCCTTGATTCAACATACAGGGAGAAAATCAGCAAGGTACTTAGTGTGAGGTTTCTCTGCACAAACGTTCTCCCTATAAACCGCCCTGCAATGTGGTGGGTGGTGAAAATGCTTCGGGAAGCAGCAACGGTTCCCAGATCCCGAAGCATGAGGGAGGTAGCATACTCCCCTTATTTTGATAGAGATTTCTTATCGTGA 1737 0.4421 MNWKKSEKKGWSEINKGRLLLQFKNHLTDLDNSLSSWNPSDTTPCHWWGVTCRNATTTPVTVTITSLNLPSTTLNGHLQSLSVCCRLRHLDLSQNTLVGTIPFSLSLLTALRHLDLFFNNLSSNIPTQLSHTLHRLVLLDLVNNFLSGPFPNSLTNMTSLKLGTLDLSYNEMSGEILGWISGLNRLNELNLHIIGNPELCVKGFGKCHSSRGRKYRRYAWIFRSIFAVARILFILGVAVFYVRYRNLRKKKRSLNVSKWRSFHKLGFDEFEIVKLMSEDNVIGSRSSGKVYKVVLSSGAVVAVKKLWRETKDGIGIVGSEKDEFDVEVETLGKIRHKNIVRLWSCYNSGDSRLLLYEYIPNGNLADMLKSNKKSLLDWPTRSKIAIDAAEGLSYLHHGIVPFIVHRDVKSNNILLDSEFGAKVADFGVAKIVNRTSQGAVSMSVIAGSYGYIAPEYAYTLRVNEMSDIYSFGVVILELVTEKPSNHADYGENDLVKWVSSLLEQKGMDLVIDPALDSTYREKISKVLSVRFLCTNVLPINRPAMWWVVKMLREAATVPRSRSMREVAYSPYFDRDFLS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01236 578 Gene3D Phosphorylase Kinase; domain 1 259 358 - -
Aip01g01236 578 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 175 - -
Aip01g01236 578 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 160 557 - -
Aip01g01236 578 ProSiteProfiles Protein kinase domain profile. 276 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01236 578 Gene3D Ribonuclease Inhibitor 15 132 IPR032675 -
Aip01g01236 578 Gene3D Ribonuclease Inhibitor 133 197 IPR032675 -
Aip01g01236 578 SUPERFAMILY Protein kinase-like (PK-like) 276 551 IPR011009 -
Aip01g01236 578 SMART serkin_6 276 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01236 578 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 15 175 - -
Aip01g01236 578 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 160 557 - -
Aip01g01236 578 SUPERFAMILY L domain-like 18 192 - -
Aip01g01236 578 Pfam Leucine rich repeat N-terminal domain 18 52 IPR013210 -
Aip01g01236 578 Pfam Protein kinase domain 278 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01236 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Aip01g01236 578 Gene3D Transferase(Phosphotransferase) domain 1 359 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01236 Aip-Chr1 33878870 33881652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01236 79 575 Receptor kinase-like Gene Family AT1G28440 51.172 1.31e-155 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip01g01236 Pkinase 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01236 - - aip:107632602 762.296