Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01230 ATGGGAAGTGGAGTCTCTACCTTGTGTTCCTGCCTCGAACCGGCGCCGAACCAACCGGACCTCGACAACGACGTGATCTTCGCCGCCACCGAACCGCTTGACGAAACTCTCGGCCATTCCTTCTGCTATGTCAGATCCTCCAACCGATTCCTCTCGCCAACACACTCCGATCGCTTCGTTTCCCCCTCTGCCTCACTCCGTTTCTCTCCAACTCACGACCCGATCCACAGAACCCGGCCCGACCCACCCGAAACTGCTTTCAAGGCCATTTCGGGAGCCTCCGTTAGTGCCAACAGCTCCGTTCCCAAGACAGTTATTCAGTTAGAAGAAGAGGCCACCGACTGTTCCGGTAACAGAGCAGCTGGATTAGGAGGAGGGACCGTTGTCAACGGTTTCGAGAGTACGTCGTCCTTTAGCGCGCTACCGCTCCAGCCGGTTCCTCGCGGTGGAGAGCCTTCTGGAACATTCGAGAGGGGAGGAGGGTTCTTCCTCTCGGGACCAATCGAGAGCGGTGCGCTCTCCGGGCCGCTTAATTCCGGCGCCGCCACCGCCGCCGGAGTCCCGTTCTCGGCCCCGCTGGGAGGGGTGTACGTGAGGAAAAAGAGGAAGAATGGCGTGTCCGGATTCAGGAAGGCGTTTCAGAGGGGCGTGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTCGGGAGGAAGGAAGTTCAGGCTTGCGAGGGAAAGCCGGCGCCCGTAGGGGCGGATGACGTGGCGAGAGAGGAGAGCAATGTGCAATGGGCGCTGGGGAAGGCTGGCGAGGACAGGGTGCACGTGGTAGTGTCGGAGGAGCAAGGTTGGTTGTTCGTTGGGATTTACGACGGTTTCAACGGCCCCGACGCGCCGGAGTTCCTGATGGGACATCTCTACCGTGCCGTCCACAACGAACTTCAGGGTCTGTTCTGGGAAGCTGAAGAAGCAGAGGGCAGAAACGACAATATTCCCGCTGCTGAAGTTGCTGCTGAGGTGAAAAACACTGAGGGAGATGCCAGTGAAGACTCGATCTCTCACTCGGCGACTGCGGCTGTTAAGAAGGTAACGTTTCAGGTGGAGGGAACGGAAAGCAGGAGGCGTAGGCTGTGGGAATTTCTTGCTGAGGACCCTGAAGACGGCCTTGACCTTTCTGGTTCCGATAGGTTTGCGTTTTCCGTGGATGATGCTCTCAGTGTTAACAATGCCAATGCTGGCTCCGCTGTTAGCAGAAGGTGGCTGCTGTTGTCGAAATTGAAGCATGGGTTGTCCAAGCATAAAGAGGGTCAAGGTAGGAGGCTGCTGCCATGGAGCTTTGGTGCGGAAGGGAAGGATGAGAAGGTGGAAACAGAGGCAGAGAACCCAGCTGAGGAGAAGTTTTCTTCCGGTGGAGGCCGCAGTGGTGGGAGGAGGAGGAAGGTTGGCCCGGTGGACCATGATCTTGTTTTGAGGGCATTATCTCGTGCGCTCGAGGTGACCGAGCTGGCATATTTGGATATGACTGATAAGCTTCTGGATACGAATCCAGAACTTGCTTTGATGGGTTCGTGTTTGTTGGTTTCTCTGATGAGGGATGAGGATGTGTATGTGATGAACGTTGGGGATAGCCGCGCTATTGTTGCTCATTATGAGCCCAAAGAGGGCGCTGCTGCTTGTACAGGATCCAGACTCAAGAAGGGGAACGATGGGTTGAGCACGGAGAGTATTGTTGAGGAGTCCTCGGCAGGTGAAAGCACAGGCAATTTGGGGAACGAGGATCCTGCTCCGGAAATGAGGTTGGCAGCATTGCAGCTGTCAACTGACCACAGCACCTGCATTAAAGAAGAAGTCAATAGAATTAAAAATGAGCACCCTGATGATGCGCAATGCATAGTCAATGATAGAGTAAAAGGTCGTCTCAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTTGAATGATGCGGTGTTAGAAATGTTTCGGAACGAGTATATTGGCACTGCTCCATATATATCCTGCTCTCCTTCGCTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATTCTCTCATCTGATGGGTTATATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTGGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCTCAACATTTAATTGAAGAGCTGCTTCTCCGTGCAGCAAAGAAGGCTGGCATGGGTTTTCATGAGTTGCTTGATATCCCACATGGAGATAGGAGGAAATACCATGATGATGTCACTGTCATGGTGATATCACTTGAAGGAAGAATCTGGAAATCCTCTGGGAGGTATCTGTGA 2340 0.5333 MGSGVSTLCSCLEPAPNQPDLDNDVIFAATEPLDETLGHSFCYVRSSNRFLSPTHSDRFVSPSASLRFSPTHDPIHRTRPDPPETAFKAISGASVSANSSVPKTVIQLEEEATDCSGNRAAGLGGGTVVNGFESTSSFSALPLQPVPRGGEPSGTFERGGGFFLSGPIESGALSGPLNSGAATAAGVPFSAPLGGVYVRKKRKNGVSGFRKAFQRGVPEKKRPWVVPVLNFVGRKEVQACEGKPAPVGADDVAREESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEAEEAEGRNDNIPAAEVAAEVKNTEGDASEDSISHSATAAVKKVTFQVEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKHGLSKHKEGQGRRLLPWSFGAEGKDEKVETEAENPAEEKFSSGGGRSGGRRRKVGPVDHDLVLRALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVSLMRDEDVYVMNVGDSRAIVAHYEPKEGAAACTGSRLKKGNDGLSTESIVEESSAGESTGNLGNEDPAPEMRLAALQLSTDHSTCIKEEVNRIKNEHPDDAQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMGFHELLDIPHGDRRKYHDDVTVMVISLEGRIWKSSGRYL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01230 779 SMART PP2C_4 252 765 IPR001932 -
Aip01g01230 779 CDD PP2Cc 482 767 IPR001932 -
Aip01g01230 779 MobiDBLite consensus disorder prediction 566 585 - -
Aip01g01230 779 MobiDBLite consensus disorder prediction 566 591 - -
Aip01g01230 779 Gene3D - 244 774 IPR036457 -
Aip01g01230 779 ProSiteProfiles PPM-type phosphatase domain profile. 251 767 IPR001932 -
Aip01g01230 779 PANTHER PROTEIN PHOSPHATASE 2C 29 18 777 - -
Aip01g01230 779 PANTHER PROTEIN PHOSPHATASE 2C 18 777 IPR015655 GO:0004722|GO:0006470
Aip01g01230 779 SUPERFAMILY PP2C-like 265 768 IPR036457 -
Aip01g01230 779 MobiDBLite consensus disorder prediction 448 478 - -
Aip01g01230 779 Pfam Protein phosphatase 2C 600 731 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01230 Aip-Chr1 33576590 33582159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01230 1 779 PP2C-type Phosphatase Gene Family AT2G35350 56.590 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01230 - - mtr:MTR_4g098650 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00489 05 5578800 5583857 Aip01g01230 01 33576590 33582159 PCT