Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01219 ATGGGTTGCACTGTGAGGGAAAAGCACATCAGAGCGAATCGGAGGCCCCGATCATCATCGAAACCCGATTCTGATTCGTGCGACAGAGACCCGATTTCCAAATCTATAGCTGAGTCTGGCCTCAAGCCCTTCAGGTACCATCACCATGTGCCTCCCAACAACAACAACAACGAACCTTCTTCTACCCAGAACACGAACCCTAACTCCGATGAAACGGGTTGGGGTTACTGCACGGAGGAACAGTTGGAGGAGATCCTCTTGAAGAACCTCGAATTCATTTACAACGAAGCGGTTTCCAAGCTCGTCGCTTTGGGTTACGATGAGGACGTTGCGGTCAAAGCTATTTTGAAAAACGGCCATTGCTACGGCGGAATGGATGTTCTCACCAACATACTACATAATTCGTTAGCCTACTTGAATAATAATAATAACAATAATAATAATAATAGTGCTGGAAATGGTGGGAATTTGGACGAGAGTGAGGCTGCTTTCTCTGATTTGAGGCACTTGGAGGAGTATTCTCTTGCTGGTATGGTGTGTTTGTTGCAACAGGTGAGGCCTCATTTGAGCAAAGGTGATGCAATGTGGTGTTTGCTAATGAGTGATCTTCATGTTGGTAGGGCCAGCACTATGGAGATTCCGGTCCCGGGAAGTGGGTACCCGAGTACTGCCACTGTGGCTGCCACGGTTGAAGGTGGTGGTAATTCGGTGGTAGTTGGTGATGGTGGTGGCAATTCGGCGGTTGGTGGTGGTGGTGTTATGGCTCCTGCATTGTGTAGGTTTCATGGTGGTTGGGGATTTGGGAATGGGGCAGGCTCAGGGTTTCAGGCGAATGGGTTGTTCTCTTATGGTGCTGCTGAGATGAATTTGCATCTGCAAAGGGATATTGAGTTCCCTAAGAGGTTTAATCTTTCGCCTTCCATGAAATCATTGTTGAAGAGGAATGTGGCTGCGTTTGCTGCTGGTTTTAGGGCGAATTCGAAGCAATTGCAGACTCAGGCTCAGGTGAAGGCCTTTTCTGGTAGTGCTTCTGTGTCGAAGTTGGATTCTCCGGCTGTGAATGGGGCTGAAGCACTGGTTGAGCAGCCTGGACAGGTGGGAGAATCTCAGAATGTTGATAGCCAAGATGCTGTGAATTCAGTGCTGAGTAAGTTTCGTGATCTTAATCTTGATGAGAATTTGGAGCTTGTGGCAGAGGATCAGAAGGATGAGGTGATAGTCACTTTGTTTCATCAGATCAAGGATCTTGAGAAACAGGTCAAGGAGCGAAAAGATTGGGCTCATCAGAAGGCAATGCAAGCTGCGAGAAAGCTAAGCAGTGATCTTACTGAGCTCAAGATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGGAAACAGGCACTCGAGGACACCACCATGAAGAGGCTCTCAGAGATGGAAAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCGAATGCAGCCGTGAGGAGACTAGAGACAGAGAATGCAGAAATTAAAGCAGAGATGGAGGCTTCCAAGTTAAGTGCATCAGAGTCCGTGACAGCTTGCTTAGAGGTTGCAAAAAGGGAGAAAAAATGCTTAAAGAAGCTTCTTGCTTGGGAGAAACAGAAAGCTAAGCTGCAGCAGGAGATTGCTGATGAAAAAGCAAAGATATCGGAGACACAAGAAGTCTTGGCTCAGATTAGACAGCGCCAAAAAGACGCGGAGGTTAAGTGGAAAGAAGAGGTGAAGGCTAAAGAGGAAGCTTCAGCACTAATCGAAGAGGAGCGCCACTCTAAGGAAGCAGCTGAATCTAATAATAAGAGGAAACTCGAGGCTCTACGTCTGAAGATTGAGATAGATTTCCAGCGCCACAAGGACGATCTACTGCGACTTGAGCAAGAGCTCTCACGGCTTAAAGCGTCTGCACAGTCTGCCGAGCTGCATCATCAGTCAAATGCTGCTTCACCTGTTGGTGGCAACTCTGAGGGCGCAATGCCCCAGAGAGATACAATTGCCAAGCTACTTCAAGAACTAAATAATCTAGAGGATTATTCGGAGAAGGAAGTCAATGGCAACAGAGAATGCATTATATGCATGAAAGATGAAGTTTCCATTGTTTTCTTGCCGTGTGCACACCAAGTTATGTGTGCCGGTTGCGGTGATGAGTATGGAAGAAAGGGAAAAGCTGCTTGTCCTTGCTGCAGGGTTCCGATCCAACAACGAATTCGGGTGTTTGGTGCAAGCTCATAG 2250 0.4738 MGCTVREKHIRANRRPRSSSKPDSDSCDRDPISKSIAESGLKPFRYHHHVPPNNNNNEPSSTQNTNPNSDETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDEDVAVKAILKNGHCYGGMDVLTNILHNSLAYLNNNNNNNNNNSAGNGGNLDESEAAFSDLRHLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASTMEIPVPGSGYPSTATVAATVEGGGNSVVVGDGGGNSAVGGGGVMAPALCRFHGGWGFGNGAGSGFQANGLFSYGAAEMNLHLQRDIEFPKRFNLSPSMKSLLKRNVAAFAAGFRANSKQLQTQAQVKAFSGSASVSKLDSPAVNGAEALVEQPGQVGESQNVDSQDAVNSVLSKFRDLNLDENLELVAEDQKDEVIVTLFHQIKDLEKQVKERKDWAHQKAMQAARKLSSDLTELKMLRMEREETQRLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVTACLEVAKREKKCLKKLLAWEKQKAKLQQEIADEKAKISETQEVLAQIRQRQKDAEVKWKEEVKAKEEASALIEEERHSKEAAESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHHQSNAASPVGGNSEGAMPQRDTIAKLLQELNNLEDYSEKEVNGNRECIICMKDEVSIVFLPCAHQVMCAGCGDEYGRKGKAACPCCRVPIQQRIRVFGASS 749
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01219 749 Coils Coil 529 577 - -
Aip01g01219 749 MobiDBLite consensus disorder prediction 16 32 - -
Aip01g01219 749 PANTHER OS05G0141500 PROTEIN 1 748 IPR046934 -
Aip01g01219 749 MobiDBLite consensus disorder prediction 642 665 - -
Aip01g01219 749 MobiDBLite consensus disorder prediction 1 74 - -
Aip01g01219 749 ProSiteProfiles Zinc finger RING-type profile. 695 735 IPR001841 -
Aip01g01219 749 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 748 - -
Aip01g01219 749 SUPERFAMILY RING/U-box 694 741 - -
Aip01g01219 749 Coils Coil 621 648 - -
Aip01g01219 749 Coils Coil 585 612 - -
Aip01g01219 749 Pfam Family of unknown function (DUF6592) 89 209 IPR046527 -
Aip01g01219 749 MobiDBLite consensus disorder prediction 50 74 - -
Aip01g01219 749 Pfam Zinc finger, C3HC4 type (RING finger) 692 740 - -
Aip01g01219 749 Coils Coil 473 514 - -
Aip01g01219 749 MobiDBLite consensus disorder prediction 642 658 - -
Aip01g01219 749 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 679 746 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip01g01219 Aip-Chr1 33090155 33096632 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01219 675 745 C3H Transcription Factor Family AT1G73950 33.333 3.32e-07 51.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01219 - - adu:107483267 1342.79
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00493 05 5602287 5605344 Aip01g01219 01 33090155 33096632 PCT