Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01216 ATGTCACAGAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGCATAATGTCTTCTCATACTGCATTGCAACCAGAGATTGACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAATTCCAACAGTGACAAACTTTGGGGTCAAGAGTTTGCTTTTTTGGATATAGGTTTCGTCGCGCCTTACTGA 213 0.3944 MSQKLRFFKDQINKAGIMSSHTALQPEIDLEDLEIQLAEHEHELIEMNSNSDKLWGQEFAFLDIGFVAPY 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01216 70 PANTHER VACUOLAR PROTON ATPASES 1 55 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip01g01216 70 Coils Coil 30 50 - -
Aip01g01216 70 PANTHER VACUOLAR PROTON ATPASE A1 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01216 Aip-Chr1 32536680 32537341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01216 1 54 Primary Pumps ATPases(2) AT2G28520 65.455 1.69e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01216 K02154 - gmx:100793301 94.3597