Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01208 ATGGCTGGTTTGGATTTACAAACAGCATCACTCTTCGTTCAAAACCTTCACAGACCAGAATTACACCTTCAACAACACCATTATCACCGCTCCCAACAACAACAACATGAACAAACAGAAAATCGTGCAGCTGTACCACAATTCTCAAGTGAAGATGATGATAGCAGCCAAGGCGATGGAACGGGACGCGGAAGCAGTGGCTTTGAGCTCGTCTCCGCCTGCGGAGTCCGCCGTTCCAGGGGCCGTCCGCGAGGCTCGAAGAACAAGCCAAAACCGCCAGTGGTAATCACAAGAGAGAGCTCCAACACGCATAACGCTCACATCCTCGAAGTCGCGAGTGGCTCCGACGTCTTCGACAGCGTTGCCACCTACGCGCGGCTCCGCCAGCGCGGTATCTGCATCTTGAGCGGCAATGGAACCGTCACCATCGGTGACCCCGCAGCGCCCGGCTCTGTTGTCACGCTCCATGGAAGGTTCGAGATACTGTCTCTCTCTGGCTCGTTCCTGCCGCCGCCTGCTCCTCCCGGCGCGACGAGCCTCAGTATATACCTCGCCGGCGGGAAGGGACAGGTCATCGGAGGAAAAGTAGTCGGAAAGCTGATTGCGGCGGGGCCGGTGATGGTCATCGCCTCATCCTTCACCAACGTGGCGTACGAGCGGCTGCCGTTGGACCAGGACGACGAACAGGAGCTCCAAATTCAGTCGCCGCCTCCGCCGGCGGTTTCTCAGGGCTCCGCAGGCGGTTGCGGCGTGGGAAACGGCGCTTTTCTGGATCCTTCTTCTGGTTTGCCGTTCTTCAATTTTCCGCTTGGTATGCATCAGAATGTTCAGTTGCCTGTGGACGGTTACTTTTCAGGTCAACGCGCCATCCTTTAA 876 0.5708 MAGLDLQTASLFVQNLHRPELHLQQHHYHRSQQQQHEQTENRAAVPQFSSEDDDSSQGDGTGRGSSGFELVSACGVRRSRGRPRGSKNKPKPPVVITRESSNTHNAHILEVASGSDVFDSVATYARLRQRGICILSGNGTVTIGDPAAPGSVVTLHGRFEILSLSGSFLPPPAPPGATSLSIYLAGGKGQVIGGKVVGKLIAAGPVMVIASSFTNVAYERLPLDQDDEQELQIQSPPPPAVSQGSAGGCGVGNGAFLDPSSGLPFFNFPLGMHQNVQLPVDGYFSGQRAIL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01208 291 CDD DUF296 105 213 IPR005175 -
Aip01g01208 291 ProSiteProfiles PPC domain profile profile. 99 234 IPR005175 -
Aip01g01208 291 Gene3D - 105 236 - -
Aip01g01208 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 215 IPR005175 -
Aip01g01208 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 233 - -
Aip01g01208 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 286 IPR014476 GO:0003680
Aip01g01208 291 MobiDBLite consensus disorder prediction 37 63 - -
Aip01g01208 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 286 - -
Aip01g01208 291 MobiDBLite consensus disorder prediction 25 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01208 Aip-Chr1 31291003 31292178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01208 1 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 52.104 1.09e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01208 - - jre:108994023 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00498 05 5657600 5658925 Aip01g01208 01 31291003 31292178 PCT