Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01200 ATGAAAGCTTCCAAGAAGCAATGCACAGATGAGAGTAAAATGCCAAAATCCAACAAGTCAGGAACATTCAAGGATCCTCAAAGTGTTGCTGCTAAGGTTGATTTGGTTACAATGCTGGAGAAAGCAATTAGCTATGTGAAGTTTCTTCAGCTTCAAGTAAAGGTGTTGGCAGTTAATGAATTTTGGCCTGTTCAAGGTGGAAAAATTTCTGATATCTCTCAAGTAAAAGAAGCCATTGATGCCATTCTTTCATCCCAAAGATCGGAGAAACAAGTTCAACAACCTCAAAGTAGATGA 297 0.3838 MKASKKQCTDESKMPKSNKSGTFKDPQSVAAKVDLVTMLEKAISYVKFLQLQVKVLAVNEFWPVQGGKISDISQVKEAIDAILSSQRSEKQVQQPQSR 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01200 98 MobiDBLite consensus disorder prediction 1 24 - -
Aip01g01200 98 PANTHER BHLH TRANSCRIPTION FACTOR 31 88 - -
Aip01g01200 98 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 59 IPR036638 GO:0046983
Aip01g01200 98 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01200 Aip-Chr1 29875715 29876328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01200 24 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 60.000 2.70e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01200 - - aip:107615496 150.214