Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01192 ATGGGCGGCTCGCCTCAGTCTACCCTTAGCGGAATCGGAAGCTGGTCCGGCCGTAGCTTAGTTTCCAGCGAAGGAACACCGAACGGATCTTCCCGTGTTCCTTCCCCTTCGATGACGCCGTTTGCCAACCAAAACGACCCTTGGGAGGTTATATACCAAGCCGCAGGACAAGTGGCCAGGATGAAGCTGAACGACCACGTGTCTCAGAGCAACAGAGGGTTTCTTAACTCTGCACGCACCACTGCAGCAGCACCGAAGAACCTCCACACCACCGTATGCCGCTCGTTCTATAACCACGCTCTTCAGGTTTCTCAAGAGCAGGTGTTGAATCAACAGTGTGGTTCTACTTGGGGAAGGCAGGGGGCTGGGAGTTTTGAGAATCTTCAGAACAAGCTCTCTGATCTTGTTGAACGCCCCAACTTGAACAATTTTAGTTGGAACTACACAATCTTCTGGCAGTTTTCACAGTCCAAATTCAAAAAAGATTGTGTTGTTCTTGGTTGGGGTGATGGCTGTTGCAGAAAACCAATCGAAGGTGAAGAAGAAAGAGAAGCTTTGAGACTTGGATTTGATGATGATGAGGTTGTTCAGAGAATGAGGAAGGGGGTGCTGTAG 615 0.4992 MGGSPQSTLSGIGSWSGRSLVSSEGTPNGSSRVPSPSMTPFANQNDPWEVIYQAAGQVARMKLNDHVSQSNRGFLNSARTTAAAPKNLHTTVCRSFYNHALQVSQEQVLNQQCGSTWGRQGAGSFENLQNKLSDLVERPNLNNFSWNYTIFWQFSQSKFKKDCVVLGWGDGCCRKPIEGEEEREALRLGFDDDEVVQRMRKGVL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01192 204 PANTHER MYC 122 204 IPR045084 GO:0003700|GO:0006355
Aip01g01192 204 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 128 182 IPR025610 -
Aip01g01192 204 MobiDBLite consensus disorder prediction 1 44 - -
Aip01g01192 204 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 122 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01192 Aip-Chr1 29643303 29644165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01192 123 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 61.905 1.80e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01192 - - aip:110269249 255.373