Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01179 ATGCTCGCCAAATCTGGAAAAAACTGGAGGTTATTTGTATTCCTTGAAAACCCTGCCAACATCTTATCAATACACAAATCATTGAGCGTGTCATCCTCTGATGGCACGGATGAAGATGAGATCCAACACCATAACCTTCATCCTCATCATCACTCTGAGTTTTCTTCTTCGAAGCCTTGGAATGGAGGCGCCAACAACAACAACAACAATGTTATGGGCGCAACGGTGGTTATTCCTCCTGCAACCAGCGTCCATGAGTTGCTTGAATGTCCCGTTTGCACCAATTCAATGTATCCCCCAATTCATCAGATTTCTTGCAGTGCCATAATGGGCATACATTAA 342 0.4386 MLAKSGKNWRLFVFLENPANILSIHKSLSVSSSDGTDEDEIQHHNLHPHHHSEFSSSKPWNGGANNNNNNVMGATVVIPPATSVHELLECPVCTNSMYPPIHQISCSAIMGIH 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01179 113 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 29 105 - -
Aip01g01179 113 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 29 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01179 Aip-Chr1 28885077 28889028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01179 84 103 C3H Transcription Factor Family AT2G41980 90.000 4.19e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01179 K04506 - pop:7496400 103.99