Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01160 ATGAATGGTTTCACTGTGAGGAAGAATAAGATTTGGCGAAATGTGAGGAATGAGGTTACTCAACAAGAATTTGTATGTTTCCGGCATAGGTTCAGAGGAATCGGGTCCGTTAACGACGGCAAGCGACAAAAACGTGAGCCAAAGGCGGAGACCAGATGCGGCTGTGAGGCAGAGATGCGCGTCCACGTGCACTCCGATAGTGGTAGATGGATAATATCATACTTTCAGGACGTTCACAACCACGAGTTGCTGGACGATAGACTGACTTTCATGCTACCGGGCCATAGGAAAATGGATGCAGCCGTCGTGGAACAAATGAACATGATGCTTAGAGTTGGGATTAAAACGCCACATATTTATTCCTCTTTTGTGCAGACTGTCGGGGGATTCCAAAACCTTCCATTTCTAAAAGGGGATATTCAACTGGATTATGGTTTGTTTGGGGATGTGGTGGCATTTGATACGACATATCGGAAGAATAAGTATATGTGTCCACTGGTTGTGTTTTCTGGAGTGAATCACCATAACCAAACAATTGTGTTTGCCGCTGCGCTAGTTGCAAATGAGAATGAGCAAACTTACACCTGGTTGCTGCAACAGTTCCTGGACGCCATGAATGGTAAAGTACCTGGGTGTGTGATAACAGATGGGCATGGAGCGATGAAAAAGGCAATTGAAGCGGTGTTTCCTGGGGCTTATCACCGTTTGTGGGCGTGGCATCTGCTGCGGAATGCCACTTCTAACCTAAGAAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGTTGTTTGATTATGAGGTGTGGGAGTTTGAAGATCATTGGCATTATATGGTGGATGTGCTTGGTCTGTCTGATAATCAATGGGTTTCTGACCTTTACTCTAGCAGAAGGATGTGGGCAACTGCACATATAAGGGGCAACTTCTTTGGGGGTTTTCGTACAACGTCAAGGTGTGAAGGATTGCACTCAATGCTGGGTAAATTTGTCCAGTCTCGCCATAATTTGAGGGACTTTATTGAGCAGTTTATGCGTTGCATATCCCAAATGAGGTCCAGGGAAGCACACTCTGATATGTTATCCGTGGTTGGGGAACCAGTGCTATAG 1107 0.4526 MNGFTVRKNKIWRNVRNEVTQQEFVCFRHRFRGIGSVNDGKRQKREPKAETRCGCEAEMRVHVHSDSGRWIISYFQDVHNHELLDDRLTFMLPGHRKMDAAVVEQMNMMLRVGIKTPHIYSSFVQTVGGFQNLPFLKGDIQLDYGLFGDVVAFDTTYRKNKYMCPLVVFSGVNHHNQTIVFAAALVANENEQTYTWLLQQFLDAMNGKVPGCVITDGHGAMKKAIEAVFPGAYHRLWAWHLLRNATSNLRNPRFTSEFKKCMLFDYEVWEFEDHWHYMVDVLGLSDNQWVSDLYSSRRMWATAHIRGNFFGGFRTTSRCEGLHSMLGKFVQSRHNLRDFIEQFMRCISQMRSREAHSDMLSVVGEPVL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01160 368 PANTHER OS02G0262500 PROTEIN 108 359 - -
Aip01g01160 368 PANTHER OS02G0262500 PROTEIN 2 131 - -
Aip01g01160 368 Pfam MULE transposase domain 150 244 IPR018289 -
Aip01g01160 368 Pfam FAR1 DNA-binding domain 2 84 IPR004330 -
Aip01g01160 368 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 131 IPR031052 GO:0006355
Aip01g01160 368 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 108 359 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01160 Aip-Chr1 27201085 27202354 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01160 MULE 1.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01160 - - aip:107627027 514.227