Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip01g01159 | ATGCTATACACATACAATCATGTAGCTCATGGATTCTCCACAAGGCTAACCAACCAAGAAGCTGAAACACTCTCCAAACAACCGGGGATTCTTTATGTCATGCCTGAAGTTAGATATGAGCTTCACACAACAAGAACACCAGAGTTTCTTGGATTGGATAAGGCCACAACACTTTTTCCTGCTTCTAAGCAGCAGAGTCAGGTGGTTATTGGAGTGCTAGACACCGGTGTTTGGCCGGAGCTGCAGAGCTTGGACGACACCGGACTCGGACCGGTGCCGAGTGGCTGGAAAGGTGAGTGTGAAATTGGAACCAACTTCAATTGA | 324 | 0.4753 | MLYTYNHVAHGFSTRLTNQEAETLSKQPGILYVMPEVRYELHTTRTPEFLGLDKATTLFPASKQQSQVVIGVLDTGVWPELQSLDDTGLGPVPSGWKGECEIGTNFN | 107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip01g01159 | 107 | Pfam | Peptidase inhibitor I9 | 1 | 42 | IPR010259 | - | |
| Aip01g01159 | 107 | PANTHER | SUBTILISIN-LIKE SERINE PROTEASE | 1 | 107 | - | - | |
| Aip01g01159 | 107 | Gene3D | Peptidase S8/S53 domain | 43 | 107 | IPR036852 | GO:0004252|GO:0006508 | |
| Aip01g01159 | 107 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 107 | IPR045051 | - | |
| Aip01g01159 | 107 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 42 | IPR037045 | - | |
| Aip01g01159 | 107 | SUPERFAMILY | Subtilisin-like | 7 | 86 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip01g01159 | Aip-Chr1 | 27002419 | 27002742 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip01g01159 | 1 | 106 | Subtilisin-like Serine Gene Family | AT5G67360 | 64.486 | 9.41e-44 | 149 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip01g01159 | - | - | gmx:100793808 | 189.119 |