Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01141 ATGGCGACGAAGAAGCAGAACGATGATAAAAACCAAGAAGGCGGGCTTTACTCACTAGTGCCCCCCAGTCCCCAACCTTCGTTCTCACCGTCGAAGAAGCCCTATGCCGAGTTAGAACTTGCCACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGATACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGTCAAAAAATTGCCATTGGAGCTGCTTGTGGGTTACGATATCTTCATGAAGAGTGTAAAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACGTTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGTAACATTCGGGTATTTGGCTTCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGCTCTCATGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTGGATGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACTGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGGGATCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGAGAAGCTATCTCTTGACAAATAG 1116 0.4695 MATKKQNDDKNQEGGLYSLVPPSPQPSFSPSKKPYAELELATGGFSEANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRILVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAACGLRYLHEECKVGCIIHRDMRPNNVLITHDFEPLVGDFGLARWQPDGDTGVETRVIVTFGYLASEYAQSGQITEKADVYSFGVVLVELVTGRKAVALMRPKGQQCLTEWARPLLDEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDCDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYRDPLLEESLESFSEKLSLDK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01141 371 Gene3D Transferase(Phosphotransferase) domain 1 121 326 - -
Aip01g01141 371 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 20 369 - -
Aip01g01141 371 ProSitePatterns Tyrosine protein kinases specific active-site signature. 166 178 IPR008266 GO:0004672|GO:0006468
Aip01g01141 371 MobiDBLite consensus disorder prediction 1 33 - -
Aip01g01141 371 ProSiteProfiles Protein kinase domain profile. 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01141 371 Pfam Protein tyrosine and serine/threonine kinase 50 314 IPR001245 GO:0004672|GO:0006468
Aip01g01141 371 CDD STKc_IRAK 51 316 - -
Aip01g01141 371 Gene3D Phosphorylase Kinase; domain 1 23 120 - -
Aip01g01141 371 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Aip01g01141 371 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 20 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01141 Aip-Chr1 25926399 25929008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01141 35 321 Trihelix Transcription Factor Family AT1G70460 53.082 9.14e-100 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip01g01141 PK_Tyr_Ser-Thr 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01141 - - ahf:112783851 645.195