Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01133 ATGATTTTCAGAGCACCCTCAGACTCTGTTGATGTTTGCATGTGTTGTGCCACCACTGGCTCTCCATTCATATCCACACTGGAGCTTAGGCCCTTGAATGTGTCAATGTATGCCATGGATTTCGAGGATGATTTCTTCTTGAAAGTGGCTGCAAGGATCAACTTTGGTGCTACTAGCAAGGATGCTGTCAGGTATCCAGATGATCCATATGATAGAATTTGGGATTCGGATATCATTAAAAGACAAAACTTTCTTGTTGGGGTGGCCCCAGGCACAATTAGAATTAACACAATAAAGAACATAGATATACAGACAAGGGAATACCCTCCTGTTAAAGTGATGCAAACCGCGGTTGTAGGCACAAAACAGGTACTCAGCTACAGACTGAACCTTGAAGACTTTCCTGCCAACGCTAGAACTTACGCATATTTTGCAGAGATCCAAGATCTCGGTAAGAACGAGACTCGAAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTAGTTAACATAGCTGAGAATGCAAATGGTAGCTACACTCTATATGAACCAAGTTATATGAATGTGAGTATGGATTTTGTTCTTTCCTTCTCCTTTGCTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGAAAATAAGAAAATATGTTGAAATCGCTTCCAAAACTGACAAAGAAGATGTAAATGTAATAAATGTGTTTCGCTACTTGTCTTCCGATACTGACCCAAATAACAGGGATCCCTGTGTTCTAACACCCTGGGAGTCGGTTAATTGTAGTGAAACTACCCCTCCAAGAATCATAAAGATAAACCTGTCAAGAAGGAATGTGAAAGATGAAATTCCACAAGAGCTCAACAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGTAACTTGCTTATAGGAACACTACCTGACATGAGCAATCTTATCAATCTAAACCTTGTGCATTTAGAGATCAACAAATTGACTGGTCCATTACCATCTTACTTGGGTAGTTTGCCAAATTTGCAAGCACTGTTCATACAAAAGAACTCATTTAGCGGAAAAATACCAACAGGACTATTATCTGGAAAAATTATTTTCAACTATGATAATAATCCTGAACTACATAGAGGGAACAAGAAGCATTTTCAGTTGATACTAGGAGCTTCAATTGGAATACTAGTAATATTATTACTATTATTCTTAACAAGTCTTCTGCTAATGCATAATGCACGGAGAAAGGCATCTAAACAGAAATGTGACGAAAAAGGTTTGTCGTATGAAGGTAGTACAAAGCCATTGACTGGATACTCATTCGGTAAGGGTGGGACTTTAATGGATGAGGGTACTGCTTACTATATTTCACTCTCAGAGTTGAAAAAAGCTACTAATAATTTTTCAAGAAAAATCGGGAAAGGGAGCTTTGGATCTGTCTACTATGGGAGAATGAAAGATGGAAAGGAGATTGCGGTTAAGACTATGACAGATCCATCCAGCCATGGGAACCAACAATTTGTGACTGAGGTAGCTCTCCTCTTAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGAATATTCTTGTTTACGAGTACATGCACAATGGCACATTAAGGGATCACCTTCATGAAGGTTGGAGTCAGAAACAATTAGACTGGTTAGCACGGCTTCGGATTGCAGAAGATGCAGCGAAAGGCCTTGAATACTTGCACACAGGATGCAATCCTAGTATTATTCACCGAGATGTAAAGACGAGCAATATTCTCCTCGACATCAATATGAGAGCAAAAGTGTCAAATTTTGGACTATCAAGGTTAGCTGAAGAAGATTTGACTCATATATCAAGTGTTGTAAGAGGAACTGTAGGCTACCTGGATCCTGAGTACTATGCAAGTCAACAAATATTCAAAAAGAGTGACGTATATAGTTTTAGAGTTGTTGTGCTGGAATTGATATCTGGAAGAAAGCCGGTATCACTAGAAGATTATGGTCCTGAAATGAATATAGTTCATTGGGACAATTTATCATACTGCAAGTTCTTTAGATGGTTGGATGATGTTGCTGGAGATGTGGAGGTTCAAAGTTCTAAGCAAGGAGTGGAGGATAGATTAATTGATTTGGAGGAGAGAATTCTGAGATTGGAAATGGACTGTAGAAATAAGAAAACTCCAAACAAAATTACTGGTAGTAGATTTAGGAATGTTGTGTATTTTATGGCTAGTTTTTTAATTGCAAATGTATGGAGCAAGGATTCTGGGTGA 2292 0.3848 MIFRAPSDSVDVCMCCATTGSPFISTLELRPLNVSMYAMDFEDDFFLKVAARINFGATSKDAVRYPDDPYDRIWDSDIIKRQNFLVGVAPGTIRINTIKNIDIQTREYPPVKVMQTAVVGTKQVLSYRLNLEDFPANARTYAYFAEIQDLGKNETRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSMDFVLSFSFAKTRDSTQGPLLNAMKIRKYVEIASKTDKEDVNVINVFRYLSSDTDPNNRDPCVLTPWESVNCSETTPPRIIKINLSRRNVKDEIPQELNNMEALTELWLDGNLLIGTLPDMSNLINLNLVHLEINKLTGPLPSYLGSLPNLQALFIQKNSFSGKIPTGLLSGKIIFNYDNNPELHRGNKKHFQLILGASIGILVILLLLFLTSLLLMHNARRKASKQKCDEKGLSYEGSTKPLTGYSFGKGGTLMDEGTAYYISLSELKKATNNFSRKIGKGSFGSVYYGRMKDGKEIAVKTMTDPSSHGNQQFVTEVALLLRIHHRNLVPLIGYCEEEYQNILVYEYMHNGTLRDHLHEGWSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSNFGLSRLAEEDLTHISSVVRGTVGYLDPEYYASQQIFKKSDVYSFRVVVLELISGRKPVSLEDYGPEMNIVHWDNLSYCKFFRWLDDVAGDVEVQSSKQGVEDRLIDLEERILRLEMDCRNKKTPNKITGSRFRNVVYFMASFLIANVWSKDSG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01133 763 Pfam Malectin-like domain 3 220 IPR024788 -
Aip01g01133 763 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Aip01g01133 763 Gene3D Transferase(Phosphotransferase) domain 1 543 738 - -
Aip01g01133 763 SMART serkin_6 467 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01133 763 Gene3D Phosphorylase Kinase; domain 1 447 542 - -
Aip01g01133 763 SUPERFAMILY Protein kinase-like (PK-like) 452 687 IPR011009 -
Aip01g01133 763 Coils Coil 707 727 - -
Aip01g01133 763 SUPERFAMILY L domain-like 257 378 - -
Aip01g01133 763 ProSiteProfiles Protein kinase domain profile. 467 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01133 763 PANTHER TYROSINE KINASE DOMAIN PROTEIN 1 685 - -
Aip01g01133 763 Gene3D Ribonuclease Inhibitor 232 383 IPR032675 -
Aip01g01133 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Aip01g01133 763 PANTHER OS07G0107800 PROTEIN-RELATED 1 685 - -
Aip01g01133 763 Pfam Protein tyrosine and serine/threonine kinase 469 668 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01133 Aip-Chr1 25626141 25633863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01133 1 682 Receptor kinase-like Gene Family AT1G67720 70.073 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip01g01133 Malectin_like 7.4e-50 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01133 - - gmx:100807148 1142.49