Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01124 ATGGGTGAGTATGAAGATAATGTAGGGTTGAGTGTGGATGATATACATAAGAAATGTTGGGACAACATAGATGGTGCTTATGAGTTTTACAGGAAGTATGGAAGATTTCATGGATTTGGCATACGGAAAGCCGATTCAGGAAAGGACTGTGACAGAAATGTGGTTAGATATAGGTTTTTCTACAATAGGGAAGAAAGGCACGGAAGACACTATGACAGAATTGATCAAATGAGAGTACACAAACTAGAGACCAAAGCTAATTGCAGAGGGAAGTTGTCAATATATTTTGAGAAAATCGAGCAGATTTGGAAAGTTAGGAAAGTAATTCTAGAGCACAATCATGAATTGACTCCTGTCAGCATGGCTCATATGATTGCAAATCATCGTGAGATTTCAGAAGCAGCAAAAGCTACGACAGATGGGATTCATGCGCATGGGATTGCAACATAA 450 0.3889 MGEYEDNVGLSVDDIHKKCWDNIDGAYEFYRKYGRFHGFGIRKADSGKDCDRNVVRYRFFYNREERHGRHYDRIDQMRVHKLETKANCRGKLSIYFEKIEQIWKVRKVILEHNHELTPVSMAHMIANHREISEAAKATTDGIHAHGIAT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01124 149 Pfam FAR1 DNA-binding domain 28 118 IPR004330 -
Aip01g01124 149 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 130 - -
Aip01g01124 149 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 11 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01124 Aip-Chr1 25429968 25430417 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01124 FAR1 5.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01124 - - ahf:112730492 200.29