Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01115 ATGACGCTGAGGAGTGAAGATCTTTTGAGGCAAAGGTTAGGATCATGTGATGTCATTACCAAATGTGCTTCTATACTTGGCGTATCTATGTTTAAGTTAATCAAATTGGGGGAAGAAAAGAAAAGAAACTTGCAATTATATAGTTTAAGTGTTTCTGCCACTGCCCTTCTTTCTCGCAGCCGGTGTGTTTATGTGTGCTTATATGGTTTCATGGTTTATGTGTGCTTATATGGTTTCATGGTTCCTGCTGGTGAAGCTTACACAAAGGCACTTGAGGTTGCCAGGAATATCAATGAGAAGAGGCACCCGCACCACAGCTCGACGGCAAGTCTCGCAACGATACTTTCGATCTTGACTTTGAAGAATGACTTCAAGCAGTTAGAAGCCACAACAGATTGTTCTATTTTATATTCACCAGATTTTGCGGACATGTCTTTGACTTCTTCTATGGCAATCAAAATCTATTGCTCAATGATATCAAAGAAATTGAATACTGCTGAGTACTTCTGTGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGCTACTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGACGAGTGTTCTTTTAG 696 0.4167 MTLRSEDLLRQRLGSCDVITKCASILGVSMFKLIKLGEEKKRNLQLYSLSVSATALLSRSRCVYVCLYGFMVYVCLYGFMVPAGEAYTKALEVARNINEKRHPHHSSTASLATILSILTLKNDFKQLEATTDCSILYSPDFADMSLTSSMAIKIYCSMISKKLNTAEYFCDRFNLKLHTAGIIAASFGLANLFSRPGGGFISDAVSKRFGMRATCGMTFGIVPFVSRRVFF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01115 231 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 165 213 IPR044772 GO:0015112
Aip01g01115 231 Gene3D MFS general substrate transporter like domains 133 228 IPR036259 -
Aip01g01115 231 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 165 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01115 Aip-Chr1 25040421 25042561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01115 155 228 Inorganic Solute Cotransporters AT1G12940 43.590 1.65e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01115 K02575 - aip:107616635 202.601