Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01108 ATGAAAACCACCCTCACCACCACCACCACCACCACCTCCTCCACCTACTTGTCCCCCTCCATCACCACCGCCGCGTCCTCCTCCACCACCACCACCACGACCACCACCTCCTCGTCCTCCTCCACAGACACGGTTGATAAGAGCACGAGGAGCTCAGATCCATGCAAGTACAAGGGGATAAGGTGCGCCACATATCCAAACACAAAGGAGAAAGCTGTGGCCGGAATAGACCTCAACCAAGCCAAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAATAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATACAAGTTCTTCAGGCTACCAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAATAACTTGTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGGTGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAAAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGCTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTATGGTCCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAGCAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACATGTTCTTTTCCAATGCGAAACCATGCTCTAACCCCAAATCTTTCCATTACATCCCTTGCAAACCGTACTACTCGCAGTTACACTCCCAAGCCGTGGCGCCGCCGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1218 0.5025 MKTTLTTTTTTTSSTYLSPSITTAASSSTTTTTTTTSSSSSTDTVDKSTRSSDPCKYKGIRCATYPNTKEKAVAGIDLNQAKITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVNKFKYFYELDLSNNKLSGAFPIQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNLFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGPVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIESKVLDVNNNCILGLPNQRSPEECHMFFSNAKPCSNPKSFHYIPCKPYYSQLHSQAVAPPLLQEDSSFYSSPPEPVTYKTLRPHRL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01108 405 MobiDBLite consensus disorder prediction 26 48 - -
Aip01g01108 405 Gene3D Ribonuclease Inhibitor 27 222 IPR032675 -
Aip01g01108 405 MobiDBLite consensus disorder prediction 26 54 - -
Aip01g01108 405 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 40 376 - -
Aip01g01108 405 SUPERFAMILY L domain-like 51 334 - -
Aip01g01108 405 Gene3D Ribonuclease Inhibitor 223 359 IPR032675 -
Aip01g01108 405 PANTHER BNAC05G26270D PROTEIN 40 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01108 Aip-Chr1 24825125 24826787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01108 52 359 Leucine-rich Repeat extension Gene Families AT4G13340 45.631 9.46e-77 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01108 - - ahf:112800345 694.115