Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01105 ATGAAAACTCATAATTGGAGCTGCTTCTTTATTATCTTATCAATAGAGTTTTGGACCATCCTCTTCTTCGCCTTTCCCTCCGCAAAAGCCCTCAAGGCATTTCAATTATGTAATAATGCTTCAAAATCCAACTCAAGAAGAATTCTACACCAGCCGCTTTTTCCGGCAGCATCAGCTCCGGCGTTACCTCCGCCTTCGCCGTCACTGGACACTCCTTCCCCTCCGGAAATTCCTTTCTTCAACGAGAATCCACCAGGTCCACCGCAGGCGGACCTGAACCAGCAGCCGGCAGCGGTGGACACCACCAACGGCCGAATTGCAAACCCGACGGCAACGCAGCCGGCGAAGCCGGTTAAGACAGTGGCGATTGTGGTATCTGTCGCGTTCGTTACGTTTGCAATGCTGTTTGTGCTGGCGTTCTTCTTGTATAAGCAAACGGCGAAGCAGCAGCCGGCGGAGACGACGCAGAAGCTGGTGGCCGTAGGGTCACGAAACGAGTTGCCACCACCGGCGGCGGCGGCGCCACCGTCTAGTTTGTACTACATTGGGACGGTGGATCCAAGCAGAGCGTCGGTGAGCGAACCGAGTGAAGAAGCCACTTCGAGTGAAATGAACCGTTCTTCATATCGAAAACTGAATTCGATGAAGGTTTCAGAAAGGTACCGTCCCAGCCCCGAGCTTCAGCCATTGCCGCCGCTAAGCAAAACCGTCGCCGACGGCAGCCATCCGCCACCGGCTGCCTCCTCGTCATCTTCGTCCGATGACGAAGTGGATAGCCGAGACACGGCGTTTCACTCGCCACAGGCCTCATCTCTCAGCCTCGATGACGGTTACCACACGCCGGTTTCGCGCCATAGTTATCTCTCCAACGGTAGCGGTACTGCGGCGGCACCGCCAGTTCCTTTCTCGAAGAGAACTTCTCCGAAGTCTCGGATTTCAGCTTCGTCGGATACCAGAATCGCCATGATGCCACCAATTAAGCATGCTCCGCCACGGTCACCATCCCCGACACAGCAAGAATCTACCTCCGGTCCTTCCAGACGGCCGACATTCTCGGCACCTCCTCCAGCACCAAATTTAACTCATATTCATTCAAATATGTCCAAGAATTCAATCAATCCTCCGCCACCGCCACCACCTCCTCCTCCGCCAATGCGAGCAGCGCCCCGGAAGGAGTCTTGGTCTCGGAGCCAAGTTGCAGCATCCGCTGCAAAGAGCATTGCAAAGGCTTCAGAGGAGTTAAACAAGATGAAGAGCGTGGCATCATCTGAGAAGTTGGACGGTGATGACGTGGAAGGAGGAAGACCCAAGCTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACATCTGAGCGTGCCACTGTGTGGGACCAGTTAAAGTCAAGTTCGTTTCAATTAAATGAGGGCATGATGGAATCTCTCTTTGGCTGCGGTGCCACCAGTTCTACACCTAAAGAAACGGTTACAAGGAAATCAGTTATTCCGCCCGTTGAACAGGAGAACAGAGTGTTAGATCCCAAGAAGTCCCAAAACATTGCTATAATGCTCAGGGCACTCAATGTTACTAGAGATGAGGTCTCCGAAGCTCTCTTGGACGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAAAAGCTATGATGCTGGTGTTTCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTCCTTGACATACCATTAGCCTTCAAAAGAGTGGAAGCCATGTTGTACAGAGCGAATTTTGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACCCTCGAGACAGCGAGTGAGGAATTGAAGAACAGCCGGTTGTTCCTCAAACTCCTTGAAGCTGTTCTTAGGACAGGGAACAGAATGAATGTTGGAACCTACCGTGGCGATGCCAAGGCGTTCAAGCTAGACACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTTGTCCAAGAAATCATTAGAACGGAAGGTTCAAGTGGCGAATCGTCCAGCAAAAATGCACAGGCAGAAATGAATTCTCAATTTAATGATGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGAAACGTGAAAAATGCTGCAGGAATGGACTCCGAAGTCTTAAGTAGTTATGTCTCTAAGCTCGAATCGGGTCTTGATAAAGTGAGATTGGTTCTGCAGCATGAAAAGCCGGGTATGCAGGGGAATTTCTTCAACTCAATGAAGCTATTCCTGAAAGTTGCCGAAGCGAAAATCGTTACGATTAAGTCTGATGAGAGAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAGTACTTTCATGGGAATATGGCAAAGGAAGAAGCGCATCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGATCAGGTCTGCAAAGAAGTGGGGAAGATGCAGGACAAAACTGTGATTAGCTCCGCGAGATCCTTCAGGATAGCCGCGAGCGCGTCGTTACCAGTTCTCAACAGGTACCATGCAAGGCAAGATACAACCAGTTCAGATGAAGAGAGCTCATCTCCCTAG 2637 0.493 MKTHNWSCFFIILSIEFWTILFFAFPSAKALKAFQLCNNASKSNSRRILHQPLFPAASAPALPPPSPSLDTPSPPEIPFFNENPPGPPQADLNQQPAAVDTTNGRIANPTATQPAKPVKTVAIVVSVAFVTFAMLFVLAFFLYKQTAKQQPAETTQKLVAVGSRNELPPPAAAAPPSSLYYIGTVDPSRASVSEPSEEATSSEMNRSSYRKLNSMKVSERYRPSPELQPLPPLSKTVADGSHPPPAASSSSSSDDEVDSRDTAFHSPQASSLSLDDGYHTPVSRHSYLSNGSGTAAAPPVPFSKRTSPKSRISASSDTRIAMMPPIKHAPPRSPSPTQQESTSGPSRRPTFSAPPPAPNLTHIHSNMSKNSINPPPPPPPPPPPMRAAPRKESWSRSQVAASAAKSIAKASEELNKMKSVASSEKLDGDDVEGGRPKLKALHWDKVRATSERATVWDQLKSSSFQLNEGMMESLFGCGATSSTPKETVTRKSVIPPVEQENRVLDPKKSQNIAIMLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYDAGVSKLGSAERFLKTVLDIPLAFKRVEAMLYRANFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRTEGSSGESSSKNAQAEMNSQFNDDEFRKKGLQVVAGLSRDLGNVKNAAGMDSEVLSSYVSKLESGLDKVRLVLQHEKPGMQGNFFNSMKLFLKVAEAKIVTIKSDERKALFLVKEVTEYFHGNMAKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDKTVISSARSFRIAASASLPVLNRYHARQDTTSSDEESSSP 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01105 878 PANTHER FORMIN-RELATED 7 878 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip01g01105 878 Pfam Formin Homology 2 Domain 435 826 IPR015425 -
Aip01g01105 878 MobiDBLite consensus disorder prediction 61 97 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 189 214 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 414 433 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 371 388 - -
Aip01g01105 878 SMART it6_source 428 841 IPR015425 -
Aip01g01105 878 Gene3D Formin, FH2 domain 430 838 IPR042201 -
Aip01g01105 878 MobiDBLite consensus disorder prediction 418 433 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 333 348 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 61 91 - -
Aip01g01105 878 PANTHER FORMIN-LIKE PROTEIN 7 878 - -
Aip01g01105 878 MobiDBLite consensus disorder prediction 188 406 - -
Aip01g01105 878 ProSiteProfiles Formin homology-2 (FH2) domain profile. 428 852 IPR015425 -
Aip01g01105 878 MobiDBLite consensus disorder prediction 263 293 - -
Aip01g01105 878 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01105 Aip-Chr1 24788624 24793008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01105 409 869 FH2 protein (formin) Gene Family AT5G67470 72.414 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01105 - - gmx:100803578 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01105 01 24788624 24793008 Aip01g01105 01 24788624 24793008 ECH
Aip05g00567 05 6692374 6697178 Aip01g01105 01 24788624 24793008 PCT