Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01096 ATGGCAGGGCATAAACACAGATTAGGCAAGTGCACTGGGAAGCTGGCTCCAGTTCAACAGTTAAGGTTGGATGAGTATGTTATACCAGAGAGCAATAAATGGACTGCAGAATGGGCTAGGAATGATGCTAGAGTGTTGTTTGAAGTACAAAGACACCAAACTAAGGTTGCTGTCAACTTGCAGAGACAAACTTGTGCCTGTAATGTTTGGAAATTAACAGGGCTACCTTGCAAACATGATGTTGCTGCCATAGCAAGACTGAGGAGACAAAATCTAATGCCAAAGGACTTTGCACATAAGCTCCAACCTAAGGCACCAAACATTAAGAGACTCCCTGGGAGACCTACTAAGAAGAGGAGTGTTAATGCGGTGGCAGAGGCTCAGATGAAAGAACAAGGACACAAAGTGAAGAAGACTTTCCAGAGAAAGAAGCCGAAGCAACAACCAAGTGGAGAGAAATCAAACCCTACAAATCTAACCCCAGAACAGAATTTGGACGGAGCTGAACCAAATGCTAAGGCAAAAAGCCAGAAGAAAAAACTTTCCAAGGTTAGGACCACACCCACACTACTCAAAGAACTAAGAGTGGAGATCCCATTATCACAGTCTACACTACTACAACCAGAGAGCGGTGGATTGAGTTGGCAAGTGCCTACCGGATGTAAAGATGGTCGTGTGTCACAAGCGTCGGATGTTAACAACTTGCCTGCACCTACGGACTCTGGTGATGTTCAAAAACAGAAGTTTACAGCAAAGGGCCTCAACACACAAGACCTCATTACCCTTGTTGGTACCGCAACATGCCAATTCTTCAGCAACAGATTGTACAACTTCATCGCAAATGGCCTTGATCCTTCCATTGACCCTTCATTTGTTCCGCAACTACAAGCATTCTGCCCTCAAAACAGTGGCGGTAGCAACCGTGTTCCCTTAGATACTGGAAGCCAACTGAAATTTGATACTTCTTACTATGCTAATTTGAGGAATGGACGCGAAATTCTTGAGTCGGATGAGGCACTATGGAATGATGCTTCCACAAATATGTTTGTGCAGAAATACTTAGGCCTAAGAGGGATGCTTGGCTTGTCTTTCAGCCTTGAGTTTGGAAATTCTATGGTTAAGATGGGCAACATTGGAATCAAGACTGGTGCTGATGGTGAGTTCCATTCACCTCGTTACTCTCTCTCTCGCGTCCCCAATTTTTTCGCATCATTTTTCTTTGTCCCTCCTTTTACGAATCTTACACTCCGTTAA 1254 0.4426 MAGHKHRLGKCTGKLAPVQQLRLDEYVIPESNKWTAEWARNDARVLFEVQRHQTKVAVNLQRQTCACNVWKLTGLPCKHDVAAIARLRRQNLMPKDFAHKLQPKAPNIKRLPGRPTKKRSVNAVAEAQMKEQGHKVKKTFQRKKPKQQPSGEKSNPTNLTPEQNLDGAEPNAKAKSQKKKLSKVRTTPTLLKELRVEIPLSQSTLLQPESGGLSWQVPTGCKDGRVSQASDVNNLPAPTDSGDVQKQKFTAKGLNTQDLITLVGTATCQFFSNRLYNFIANGLDPSIDPSFVPQLQAFCPQNSGGSNRVPLDTGSQLKFDTSYYANLRNGREILESDEALWNDASTNMFVQKYLGLRGMLGLSFSLEFGNSMVKMGNIGIKTGADGEFHSPRYSLSRVPNFFASFFFVPPFTNLTLR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01096 417 Gene3D - 210 387 - -
Aip01g01096 417 MobiDBLite consensus disorder prediction 96 186 - -
Aip01g01096 417 MobiDBLite consensus disorder prediction 150 165 - -
Aip01g01096 417 ProSiteProfiles Zinc finger SWIM-type profile. 54 88 IPR007527 GO:0008270
Aip01g01096 417 ProSiteProfiles Plant heme peroxidase family profile. 151 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 SMART 26again6 63 90 IPR006564 GO:0008270
Aip01g01096 417 PRINTS Plant peroxidase signature 211 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PRINTS Plant peroxidase signature 370 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PRINTS Plant peroxidase signature 257 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 Pfam Peroxidase 210 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 Gene3D Peroxidase, domain 2 236 375 - -
Aip01g01096 417 SUPERFAMILY Heme-dependent peroxidases 210 389 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PANTHER PEROXIDASE 25-RELATED 210 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g01096 417 PANTHER PEROXIDASE 210 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01096 Aip-Chr1 24511733 24517767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01096 210 387 Peroxidase AT2G41480 56.216 4.68e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01096 K00430 - gmx:100789782 271.937