Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01095 ATGGGTGAGGAGGTGGAAGTGGTGGTGAGAGAGTTCGAGCCAAATAAAGACAGAGAGGGAGTAGAAGCTGTTGAGAGGATATGCGAAGTTGGACCCAGTGGCAAGATTTCCCTCTTCACCGACCTCCGCGGTGACCCTATTTGCAGGGTCCGCCACTCACCTACTTTCCTCATGCTAGTGGCTGAGATAGGCAATGAAATAGTGGGCATGACAAGAGGTTGCATCAAAACCGTTACATGCGGAAAGAAGCTCCATAGACACGGAAAAAACAATAATGCTGACTCCACCGCCAAACAAGTCCCTGTCTACACCAAACTAGCCTACATATTAGGCCTTCGCGTTTCACCACTCTACAGGAGAATGGGTATAGGTCTCAAGCTTGTACGGGCGATGGAGAAATGGTTTAGAGACAACGGTGCAGAGTACTCATACATGGCAACGGAAAACAACAACGTTGCGTCCGTTAATCTCTTCACCGACAAATGCGGTTACTCCAAGTTCCGTACTCCGTCTATTCTCGTCAATCCCGTTTTCGAGCACCGGGTAAAAACCTCTTCCAAAATCAAAATCATAAAGCTTGACCAAAACGACGCCGAATCACTATACCGACTCAGATTCTCCACAACGGAGCTCTTCCCGCGCGACATTGACTCTGTTCTTAACAACAAGCTCTCACTTGGAACCTTTTTGGCGGTTCCGAGAGGGAGTTACGGGCCTGACACGTGGCCCGGCCCGGCACATTTTCTTGCTTCCCCGCCTCACTCCTGGGCCGTCCTCAGCATTTGGAACTGCAAAGAAGTGTTCTCACTCGAGGTGAGAGGCGTTTCGCGCGTGAAGCGGGCTTTAGCGAAAATGACACGTGTCGTTGATCGGGCTTTCCCATGGCTCGGGCTTCCTTCGATACCGAATTTCTTCAGGCCGTTCGGGTTTCATTTCTTGTATGGAGTTGGAGGGGAGGGACCTGAAGCGGTTAAGATGGTTCGGGCTTTGTGTGGGTTTGCACACAACCTGGCGAAAGAGAAAGGGTGCGGGGCGGTGGCGACGGAGGTTTCGAGGCTGGAACCGCTGCGGTTAGGAGTGCCGCACTGGAAGATGCTGTCGTGTGAGGAGGATCTATGGTGCATAAAACGGTTAGGGGAGGATTACAGTGATGGATCGGTTGGTGACTGGACCAAATCCCCCCCTGAATTTTCAATTTTCGTTGACCCTAGAGAGGTCTGA 1221 0.5152 MGEEVEVVVREFEPNKDREGVEAVERICEVGPSGKISLFTDLRGDPICRVRHSPTFLMLVAEIGNEIVGMTRGCIKTVTCGKKLHRHGKNNNADSTAKQVPVYTKLAYILGLRVSPLYRRMGIGLKLVRAMEKWFRDNGAEYSYMATENNNVASVNLFTDKCGYSKFRTPSILVNPVFEHRVKTSSKIKIIKLDQNDAESLYRLRFSTTELFPRDIDSVLNNKLSLGTFLAVPRGSYGPDTWPGPAHFLASPPHSWAVLSIWNCKEVFSLEVRGVSRVKRALAKMTRVVDRAFPWLGLPSIPNFFRPFGFHFLYGVGGEGPEAVKMVRALCGFAHNLAKEKGCGAVATEVSRLEPLRLGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPEFSIFVDPREV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01095 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 166 IPR016181 -
Aip01g01095 406 Gene3D - 46 170 - -
Aip01g01095 406 PANTHER N-ACETYLTRANSFERASE 2 405 - -
Aip01g01095 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 194 IPR000182 GO:0016407
Aip01g01095 406 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 2 405 - -
Aip01g01095 406 Pfam Acetyltransferase (GNAT) family 51 164 IPR000182 GO:0016407
Aip01g01095 406 CDD NAT_SF 58 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01095 Aip-Chr1 24409657 24411202 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip01g01095 Acetyltransf_1 1.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01095 - - gmx:100775317 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01095 01 24409657 24411202 Aip01g01095 01 24409657 24411202 ECH
Aip05g00571 05 6746939 6749497 Aip01g01095 01 24409657 24411202 PCT