Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01088 ATGCGCTTCTTTCGTAGAGATGGCCATAACTGGCACAAGAAGAAAGACGAAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTATCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCTGGCATATGAGCATATTATTCTTGTGCATTATAGAACAACAAGTGAGATCAAACATTTAGAAGCTCAAGAACTTTGTAGGTTCAAGACAGAAAGGGAGTCTGATGAAGAAATGAAGATTACTGGTGCTACTGGCACACCAAGGTTTGAGGTTTATGGAAGTGATTTCGGATGGGGATGA 351 0.433 MRFFRRDGHNWHKKKDERTVGEAHERLKVGTIEALNCYYAHGEQNPTFQRRSYWMLDLAYEHIILVHYRTTSEIKHLEAQELCRFKTERESDEEMKITGATGTPRFEVYGSDFGWG 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01088 116 SMART CG_1_2 1 72 IPR005559 GO:0003677
Aip01g01088 116 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 2 82 - -
Aip01g01088 116 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 82 - -
Aip01g01088 116 Pfam CG-1 domain 1 70 IPR005559 GO:0003677
Aip01g01088 116 ProSiteProfiles CG-1 DNA-binding domain profile. 1 77 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01088 Aip-Chr1 24046367 24047693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01088 1 73 CAMTA Transcription Factor Family AT1G67310 71.233 1.18e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01088 K21596 - aip:107617302 162.54