Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01079 ATGTGTTCGGATTTTGGAGATGTTGAGGATTTGACTGTTGAAGATATTATGCAAAAGACCTTTAGAACTGATGATGATGTGTATGAGTTCTACAAAAACTCTAGTAGATTGGATAGGAGGCGGGTACATAAACCTGAGACGAGAACAAATTGCAAGGCGAAGTTTTCCATTCACCTAGATAAGAATGCTTCCGTATGGCGAGTAAGAAAGATCAACAACAACCACAACCATGAACTGACTCCCCATGTAATGGTGCACCTAATCCCAAAGTATAGGTCATTGACTGAAGGTGCGAAAGCGCAAATAGATGGATTGCGTGAGTGCGGGATATCGACGGCAAAAACAATGCGATATATGGCAGGATTGGTAGAAGGAAAGGCAGAGGCTGATCCTATGCTGATGGCACTGTATAATTTGACCGAGGACAGAATGCTTGCAAATATGTTTTGGGCCGATGGGGGAAGTAGGTTGGACTACCAATATTTTGGAGATGTTCTGGCTTTTGACTTGACTTACAAAAAATATAAGTACAACAGACCACTGGTTATATTCTCAGGATCAAACAATCACAAGCAGGCCACGATCTTTGGCTTTGGGCTAGTGTTGGATGAGACGATAGGGTCATATACTTGGCTGTTGAAGAGCCTGTTGGAGGTAATATGCCAAAAGATGCCATCTGTGGTTGTAACCGACGGTGATGAAGCAAtgcgggaagttgtgagagtggtattccctagagcaacccaccagttgttggtgcgcgaaattgaactccgcaagtttcgcacagatgaatcggcaagtacaccgggtcgtccaagtaatacctccggtgagtga 840 0.3595 MCSDFGDVEDLTVEDIMQKTFRTDDDVYEFYKNSSRLDRRRVHKPETRTNCKAKFSIHLDKNASVWRVRKINNNHNHELTPHVMVHLIPKYRSLTEGAKAQIDGLRECGISTAKTMRYMAGLVEGKAEADPMLMALYNLTEDRMLANMFWADGGSRLDYQYFGDVLAFDLTYKKYKYNRPLVIFSGSNNHKQATIFGFGLVLDETIGSYTWLLKSLLEVICQKMPSVVVTDGDEAMREVVRVVFPRATHQLLVREIELRKFRTDESASTPGRPSNTSGE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01079 279 Pfam MULE transposase domain 165 251 IPR018289 -
Aip01g01079 279 PANTHER OS02G0262500 PROTEIN 126 257 - -
Aip01g01079 279 PANTHER OS02G0262500 PROTEIN 47 119 - -
Aip01g01079 279 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 257 IPR031052 GO:0006355
Aip01g01079 279 Pfam FAR1 DNA-binding domain 32 80 IPR004330 -
Aip01g01079 279 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 119 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01079 Aip-Chr1 23481928 23482992 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01079 MULE 8.3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01079 - - aip:107615767 426.787