Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01054 ATGCTAAGAGACAAAATAGAAATCAGAGACAAAAAGAAAAAGGAAATTGATATACACGCCAATTTGACAGAAAATCAGTACTATGTAGAGCTGGTCCCAGAGGATAAGGAGGAGGAGAAGACACAAGAATCTAGCACCAACAAGATCAAAATATGGGAAAAGGAATTAATGGTCTCAGATGAAGAAATAAGGAGAGCGGCATTCAACATGGGCAGCCTGAAAGCTCTAGGACCAGACATTTTAAATGGATTATTCTACCAGAGATACGTAGCTTCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGCGATGTGTATAATTTTGGAATCCTTATAATGGAAGTAATTACAGGCAGGAATCCGGTTGATTATAGTCGGCCATCGGAGCAGGTGAATTTAGTTGAATGGCTAAAGAAGATGGTTGGTAACAGAAATGCAGAGGAAGTGTTGGATCCTAAACTTCCTGAGAAACCAAATTCAAGGGCCCTAAAGAGAGTACTTATTATAGCATTGTGCTGCACAGACTCAAATGCACAAAAGCAGCCTAAAATGGGACATATTGTACACATGCTTGAAGCTGAAGAATCCCCTTACAAAGAGGATCGTAGAGCTAGAAGGGAATCGGGATACACACCCAAGAATAAAGTAAACAACAATCTAAAAGAGGAGGCAACTGTTTCTAGCGATGATTGTAGAATTGAAAGTGGGATGCAGGACAATGAGACAAGATGA 735 0.3986 MLRDKIEIRDKKKKEIDIHANLTENQYYVELVPEDKEEEKTQESSTNKIKIWEKELMVSDEEIRRAAFNMGSLKALGPDILNGLFYQRYVASEYASTGMLNERSDVYNFGILIMEVITGRNPVDYSRPSEQVNLVEWLKKMVGNRNAEEVLDPKLPEKPNSRALKRVLIIALCCTDSNAQKQPKMGHIVHMLEAEESPYKEDRRARRESGYTPKNKVNNNLKEEATVSSDDCRIESGMQDNETR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01054 244 MobiDBLite consensus disorder prediction 226 244 - -
Aip01g01054 244 MobiDBLite consensus disorder prediction 197 244 - -
Aip01g01054 244 Pfam Protein tyrosine and serine/threonine kinase 86 191 IPR001245 GO:0004672|GO:0006468
Aip01g01054 244 SUPERFAMILY Protein kinase-like (PK-like) 88 193 IPR011009 -
Aip01g01054 244 Gene3D Transferase(Phosphotransferase) domain 1 20 210 - -
Aip01g01054 244 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01054 244 PANTHER RECEPTOR-LIKE KINASE PLANT 89 239 - -
Aip01g01054 244 PANTHER OS01G0323000 PROTEIN 89 239 - -
Aip01g01054 244 MobiDBLite consensus disorder prediction 197 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01054 Aip-Chr1 22603004 22608592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01054 89 196 Trihelix Transcription Factor Family AT5G38560 38.393 5.85e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip01g01054 PK_Tyr_Ser-Thr 3.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01054 - - aip:107648435 319.701