Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01042 ATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTCGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAGTCACCATAACTGCTCTTGATTGTTTTGTTTTTCTTCTTCTGGAGAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAGTTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCACCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTTTATGGTACGGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGAAGTATGGGGGTGGACTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGCTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCAAGATTATTTCATGGCTCGTGACTGCTCTGGTGATAGTGATCAATGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACAACTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACGTATTCGCCTTGGCAAAGTGTGACACAGCGAAAGTCAATTACTAACTCAGAGTTAGAGTAA 1356 0.4602 MSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVTITALDCFVFLLLENYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKIISWLVTALVIVINGYLLLEFFSHEVNGAIVGTVVCVLTTAYVAFIVYLISRAVTYSPWQSVTQRKSITNSELE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01042 451 Pfam Natural resistance-associated macrophage protein 12 373 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 1 367 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 100 119 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 309 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 174 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 125 146 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 281 300 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 70 96 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 448 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 Hamap Divalent metal cation transporter MntH [mntH]. 1 399 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip01g01042 451 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01042 Aip-Chr1 22063706 22067636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01042 1 436 Inorganic Solute Cotransporters AT2G23150 83.028 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01042 K21398 - gmx:100807811 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01042 01 22063706 22067636 Aip01g01042 01 22063706 22067636 ECH
Aip05g00594 05 7212510 7215677 Aip01g01042 01 22063706 22067636 PCT