Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01018 ATGGAATCAATTCCTTACACGATCCCTTCTTCCAAGCTCCAATCACTACTTTCTTACAAAACACCCACCAGAACTCGATCCTCCAAGCTCCTCCCTCTTCACCCTCCCCCACTTCCAATCAAACCCTTCTATTATTCACCTAAATGCCTCCCTCTCCGTCACCATCGCCTCCGCTGCCTCGCTCACTCCAACGCTAACCACCACCATCACAGCCACAGCGATCATAACCACCACGAGCACGAGCACGAGCACGACCATCACCATCACCACCACCACCACCACCACCACGCGCATCATGCCATCGACAGCGCTAACCTCACGGGACCACAACGAGCGATCATCGGGTTCGCGAAAGCCACGAGGTGGATGGACTTGGCCGATTTCTTAAGGGAGCACTTGCATCTTTGCTGCTTCTCCACAGCTTTATTCGTGGCAGCTGCCATTTGCCCTCACACTTTGCCAAAGCCTCTCGTTAAGCGCTTCCAACACTCCCTCATCATCCTTGGATTTCCTTTGGTTGGGGTTTCGGCTTCCCTGGATGCTCTAATTGAACTTAGCAGTGGAAAAGTGAACATCCATGTACTAATGGCGATGGCTGCTTTTGCGTCTGTTTTTATGGGGAACTCTTTGGAAGGAGGGTTGCTTCTTGCCATGTTCAATCTCGCGCATATAGCTGAGGAGTACTTCACGGGACGGTCGATGATCGATGTTAAAGAGTTGAAAGAGAATCATCCTGAGTTTGCGCTTGTTCTTGACACCAGTGGTGATAAGCTTCCTAATACATTCAACTTGGCGTACAAGAGTGTTCCTGTGCATGATGTAACTGTAGGATCATATATCCTTGTTGGTGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGCAATGCTACAATTACCATCGAGCACTTGACAGGGGAAATCAAACCATTGGAGGCCAAAATTGGAGACAGGATACCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTAAAGGTAACAAAGACATGGAACGAATCAACCCTAAACCGAATTGTGCAATTGACTGAAGAAGCACAGTTGAATAAACCAAAACTTCAAAGATGGTTGGATGAATTTGGTGAACGTTACAGCAAAGTAGTTGTGGTATTATCAGTTGCAATTGCCGTTATTGGGCCAATTTTATTTAAGTGGCCTTTCATTAGCACACCAGCATGCAGAGGTTCAGTTTACAGAGCCCTAGGGCTCATGGTTGCAGCATCTCCATGTGCTTTGGCTGTGGCCCCATTAGCATATGCAACAGCAATTAGTTCCTGCGCAAGAAAGGGGATATTACTCAAAGGTGGACATGTGTTAGATGCTCTAGCTTCTTGTCATACTATTGCATTTGATAAAACAGGAACATTAACCACAGGAGGACTTCTATTCAAGGCAATTGAGCCCATTTATGGTCATAATGTCAGAAAGAATGAGTCAAACATTTCTTCCTGTTGCATCCCTACCTGTGAGAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCATCCCATTGGAAGGGCTGTTGTTGACCATAGCGAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTACTTCCCTGGAAGGGGCCTTATTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAAGTGCTAAGCTATTGAAAGCATCACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCATTCTGAAGAGGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCCTATGGAAGTGAATTTGTTCATGCTGCTCTTTCGGTTAATAAGAAGGTGGTGACACTTATTCACCTAGAAGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAGAATGAAGCGATGTTACGGGTGATAATGTTAACTGGTGATCATGAGTGTAGTGCAAGGAGGGTTGCAACTGCTGTGGGCATCAGCGAGTTTCATTGCAACCTGAAACCTGAAGATAAACTGAGTCATGTAAAAGACACATCAAGAGATACAGGAGGAGGCTTAATTATGGTTGGTGAAGGAATCAATGATGCCCCTGCACTTGCTGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCTGATGTGTTATTGCTTCGTGAAAATATTTCTGCAGTGCCATTTTGTATCGCCAAGTCTCGCCAAACAACAACACTGATTAAACAAAATGTGGCTCTGGCATTGTTCTGCATTACCATGGCTTCTCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCTATTCGTGCCTTAAACGAACCATCTTGGTCATGGAAGCAGGATTTGTTACATTTGATTGGCGAGCACCGGCGTGGGAACCAGAATTCTGTGCGGTGGTGGCGCCTAGTGGATGGCTCGGAGACTAAATTTTATGGAGCCTCCAGTGTAACCTATCTAGTTACTGCCCCAACAGTTGGGTTGTCTCTGTCGATGTCCACCATTACCCAGAAGGTTCGATTCACAACGCCCAGGAGCCCCTGCCTGTTTTACCGCAGCCAATTCCTCCAGTATCTTCTTCTACCTCCTCGTCCTCTCCTTGTATCTCATGTTTTAATCTCTCCAACAGTGGAGCTGTTCTGCTTCGATAAGCGGAGCCATTAG 2727 0.4595 MESIPYTIPSSKLQSLLSYKTPTRTRSSKLLPLHPPPLPIKPFYYSPKCLPLRHHRLRCLAHSNANHHHHSHSDHNHHEHEHEHDHHHHHHHHHHHAHHAIDSANLTGPQRAIIGFAKATRWMDLADFLREHLHLCCFSTALFVAAAICPHTLPKPLVKRFQHSLIILGFPLVGVSASLDALIELSSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTGRSMIDVKELKENHPEFALVLDTSGDKLPNTFNLAYKSVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEIKPLEAKIGDRIPGGARNLDGRIIVKVTKTWNESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPILFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLLFKAIEPIYGHNVRKNESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLIATVNSIESGTGSAKLLKASLGSVDFITSFCHSEEESEKIKEAVNTSSYGSEFVHAALSVNKKVVTLIHLEDRPRPGVFNVIQELQNEAMLRVIMLTGDHECSARRVATAVGISEFHCNLKPEDKLSHVKDTSRDTGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTTLIKQNVALALFCITMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDLLHLIGEHRRGNQNSVRWWRLVDGSETKFYGASSVTYLVTAPTVGLSLSMSTITQKVRFTTPRSPCLFYRSQFLQYLLLPPRPLLVSHVLISPTVELFCFDKRSH 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01018 908 Gene3D - 451 740 IPR023214 -
Aip01g01018 908 MobiDBLite consensus disorder prediction 65 101 - -
Aip01g01018 908 MobiDBLite consensus disorder prediction 82 99 - -
Aip01g01018 908 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 266 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip01g01018 908 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 591 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip01g01018 908 Gene3D - 469 620 IPR023299 GO:0000166
Aip01g01018 908 Gene3D - 232 356 - -
Aip01g01018 908 SUPERFAMILY HAD-like 456 789 IPR036412 -
Aip01g01018 908 SUPERFAMILY Calcium ATPase, transduction domain A 266 351 IPR008250 -
Aip01g01018 908 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 192 791 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aip01g01018 908 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 62 813 - -
Aip01g01018 908 SFLD C1.7: P-type atpase like 440 742 - -
Aip01g01018 908 SFLD p-type atpase 440 742 IPR044492 -
Aip01g01018 908 SUPERFAMILY Calcium ATPase, transmembrane domain M 194 763 IPR023298 -
Aip01g01018 908 CDD P-type_ATPase_HM 136 791 - -
Aip01g01018 908 Pfam E1-E2 ATPase 266 438 - -
Aip01g01018 908 Pfam haloacid dehalogenase-like hydrolase 456 702 - -
Aip01g01018 908 PRINTS P-type cation-transporting ATPase superfamily signature 713 725 - -
Aip01g01018 908 PRINTS P-type cation-transporting ATPase superfamily signature 612 623 - -
Aip01g01018 908 PRINTS P-type cation-transporting ATPase superfamily signature 635 645 - -
Aip01g01018 908 PRINTS P-type cation-transporting ATPase superfamily signature 689 708 - -
Aip01g01018 908 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Aip01g01018 908 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01018 Aip-Chr1 21000702 21050140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01018 92 812 Primary Pumps ATPases AT4G37270 75.035 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01018 K01534 - gmx:100776309 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01018 01 21000702 21050140 Aip01g01018 01 21000702 21050140 ECH