Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01016 ATGAAAACCCTAACCCTCAGACTCCGTTGTTCATCCCCTACTCAGACAGACTCATCGTCAGCACTTGCACTCTCCCCTCTGACGACGCTTCCTCTGTCATCTCCCCTAACCCGTCTCTGCTGGCCCTCACACTCCCTTGGCGCTCACTACTCACCGCGTCGGTCAGCCAACGGAGGTCGCCTTTCCTTCCTCTGCGTCGCTAGTCTCTGCCCTCCTTCCTCTATCGTCTCTTCTCATCTGCTCCACCGCCTTCGCCGTGTGCTCCGCTTCACTCTCTGTTGTTTTCGCCTCCCCTACCCTCTCCCCTGTTTATGTCATCTCTCTCCAACCTCTCTATTTCTATCTCTGCATCTAGAATGGAGCCTTAGTTTTATGGCTATTCATATTGGGGGTGAAACGGATCTCAGCTTATACAGGCTATTACATCGGCCCAATGTTCGAATTGATGAGAAGCGGCGGTTGCATATGGCTCTTGATGTGGCTAAAGGAATGAATTACTTGCATACAAGCAATCCTCCCATTGTCCATCGAGAGTCTCCAAATCTTCTTGTTGACGAGCATTAG 564 0.5124 MKTLTLRLRCSSPTQTDSSSALALSPLTTLPLSSPLTRLCWPSHSLGAHYSPRRSANGGRLSFLCVASLCPPSSIVSSHLLHRLRRVLRFTLCCFRLPYPLPCLCHLSPTSLFLSLHLEWSLSFMAIHIGGETDLSLYRLLHRPNVRIDEKRRLHMALDVAKGMNYLHTSNPPIVHRESPNLLVDEH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01016 187 PANTHER SERINE-THREONINE PROTEIN KINASE 136 186 - -
Aip01g01016 187 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 136 186 - -
Aip01g01016 187 Gene3D Transferase(Phosphotransferase) domain 1 131 187 - -
Aip01g01016 187 SUPERFAMILY Protein kinase-like (PK-like) 136 186 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01016 Aip-Chr1 20904911 20906577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01016 136 187 MAP Kinase Kinase Kinase AT5G11850 75.926 2.85e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip01g01016 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01016 K04424 - gmx:100779790 94.7449