Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01013 ATGGCCCTCTGTCCCCATGGCAATAAATACCCGCAACATCTTACCGTCCATTCTCTCTCCGTTCTCACTTGGAGAAGAAATGTGGCAAAATCATCATCATCATCTTCCTCTTCACTCTGTAAAAAAACCATGAGCAACCATCGCCACAAAACTCTTCCTCTTTCTCTCACTTCACGGTGGTTGAAAAACGTCCTTGCATTCCTTCTCCTCGTTACCGTTAACCAATGTTATGCCCTCACTAGAGACGGCGTCCTCTTACTCTCTTTCAAGTACGCCGTTCTAAACGACCCTCTCTCCGTTCTTGCCACCTGGAACTACAGCGACGCCACTCCATGTTCTTGGAACGGCGTTACGTGCTCCACCGTTTCCGGTTCGGTGGTGCAGCTTCGGAATCTCCGGTTTCTCAACCTATCAGACAATTACTTGGCGGGAAAAATCCCTGATAATTTGTCAAACATGCAGAACCTAACCGTGTGTTCTTTGAAAAGCAATTACTTCACTGGCTTTCTCCCCAGCGGGTNNCCAGGATTTGGTGGTGACCAAGTTCATTACTTGAACATCTCATACAACAGGTTTACCGGAAGTATACCGGTTCAGTTTGCGGAGAAAATCCCGCGAAACGCAACTGTTGACTTGTCGTTTAACAATCTCACTGGCGAGATTCCGGACTCACCTGTTCTTTTGAGTCAGAAAACGACGTCGTTTTCAGGGAACCCTGATCTGTGTGGGGAACCTACGAAAAATCCGTGTCCAATTCCTTCTTCACCGTCGTCGGAGCCGAGAGCTTCCTCTCCTACTTCTCCGCCGGCGATAGCTGCGATTCCGAAGACGTTCGGTGATTCTCATCCGCTGGCGCCAGCCGGCGACGGTTCAAGTTCAAGTAACGAGAAACAGAGCGGTGGTCTAAGGAGAGGAACGATTATAGGAATCGCGGTGGGTGACGTCGTCGGCATTGGCATCTTAGCTATGATTTTCATCTACGTTTATCGGTTGAAGAAGAAGAGAGAAGTGGAGAGTGCGATCAAGGACGAAGCTTCTTTTGCGAGGAGCGAAACGTCGTCGTCTTCGGAGTCGAGAGGGTTCACAAGGTGGTCCTGCTTACGGAAGAGAGTAGAGGAGGAAAAAGAATCAGATAGCACGTGCTCTTCAGACAGCGACGTGGAAGCAGCACGTGACGGATACAACTACAACCAACACCAGAATGGTCGTCAGGAGAATTCGAAGCAGCACGAAGGGTCAGGGCAGCAGAACAAGACGGGGACTTTGGTGACTGTTGATGGCGATAAGGAGCTTGAAGTTGAGACGCTTCTCAAGGCTTCAGCGTACATATTGGGCGCCACTGGTTCAAGCATAATGTACAAGGCGGTGCTTCAAGATGGAACTTCCTTGGCGGTTCGTAGAATCGGTGAGAATGGCGTTGAGAGGTTCAAGGACTTTGAGAACCAGGTTCGGGTCATAGCTAAATTGGTTCACCCAAATTTGGTTCGTATTCGTGGGTTCTATTGGGGACACGAGGAGAAGCTCATCATTTATGACTTCGTTCCAAATGGTAGCCTCGCTAATGTTCGTTACAGGAAAGTGGGCTCCTCTCCAAGCCATTTACCATGGGAACTTCGTCTCAAGATAGCGAAAGGGGTAGCACGTGGGCTAGCTTACCTCCACGAGAAGAAGCACGTGCATGCGAATCTGAAGCCCAGCAATATTCTATTGGGCAGCGACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAAAGGATTGTGACGGGTGATACTAGCTACAAAGCTGGAGGATCGGCACGTATTTTTGGGAGCAAGAGATCCACGGCATCACGTGACAGCTTTCAAGACATAACACTTGGGCCTAGCCCAAGTCCAAGCCCAAGTTCGATTAGTGGTGTATCTCCTTACCATGCTCCTGAGTCGCTCAGGAACCTTAAGCCTAATCCAAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAACTCTTATCAGGGAAGATTGTTGTCTTGGATGATATGGGCCAAGGGACTGGGCTTTTAGCTGAGGACAAGAATCGGGCTTTGCGGATGGCTGATGCGGCTATAAGACCTGAGATGGAGGGTAAGGAAGAGGCTTTGTTGGCTAGCTTCAAGTTGGGTTACAGTTGCGTGTCTAGTGTTCCGCAAAAAAGGCCACCAATGAAAGAGGTGTTACAAGTTCTTGAAAAGATACCATCGTCATCAACTTCTTCTTCCTCATTTTTTTACAGCCACTAA 2259 0.4892 MALCPHGNKYPQHLTVHSLSVLTWRRNVAKSSSSSSSSLCKKTMSNHRHKTLPLSLTSRWLKNVLAFLLLVTVNQCYALTRDGVLLLSFKYAVLNDPLSVLATWNYSDATPCSWNGVTCSTVSGSVVQLRNLRFLNLSDNYLAGKIPDNLSNMQNLTVCSLKSNYFTGFLPSGXPGFGGDQVHYLNISYNRFTGSIPVQFAEKIPRNATVDLSFNNLTGEIPDSPVLLSQKTTSFSGNPDLCGEPTKNPCPIPSSPSSEPRASSPTSPPAIAAIPKTFGDSHPLAPAGDGSSSSNEKQSGGLRRGTIIGIAVGDVVGIGILAMIFIYVYRLKKKREVESAIKDEASFARSETSSSSESRGFTRWSCLRKRVEEEKESDSTCSSDSDVEAARDGYNYNQHQNGRQENSKQHEGSGQQNKTGTLVTVDGDKELEVETLLKASAYILGATGSSIMYKAVLQDGTSLAVRRIGENGVERFKDFENQVRVIAKLVHPNLVRIRGFYWGHEEKLIIYDFVPNGSLANVRYRKVGSSPSHLPWELRLKIAKGVARGLAYLHEKKHVHANLKPSNILLGSDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITLGPSPSPSPSSISGVSPYHAPESLRNLKPNPKWDVYSFGVMFLELLSGKIVVLDDMGQGTGLLAEDKNRALRMADAAIRPEMEGKEEALLASFKLGYSCVSSVPQKRPPMKEVLQVLEKIPSSSTSSSSFFYSH 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01013 752 MobiDBLite consensus disorder prediction 377 422 - -
Aip01g01013 752 MobiDBLite consensus disorder prediction 394 422 - -
Aip01g01013 752 MobiDBLite consensus disorder prediction 613 635 - -
Aip01g01013 752 PANTHER BNACNNG22430D PROTEIN 60 172 - -
Aip01g01013 752 PANTHER BNACNNG22430D PROTEIN 160 746 - -
Aip01g01013 752 PANTHER OS05G0588300 PROTEIN 160 746 - -
Aip01g01013 752 MobiDBLite consensus disorder prediction 287 301 - -
Aip01g01013 752 SUPERFAMILY Protein kinase-like (PK-like) 443 739 IPR011009 -
Aip01g01013 752 Gene3D Phosphorylase Kinase; domain 1 400 513 - -
Aip01g01013 752 Pfam Protein kinase domain 444 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01013 752 Pfam Leucine rich repeat N-terminal domain 82 120 IPR013210 -
Aip01g01013 752 MobiDBLite consensus disorder prediction 228 301 - -
Aip01g01013 752 Gene3D Ribonuclease Inhibitor 80 252 IPR032675 -
Aip01g01013 752 MobiDBLite consensus disorder prediction 613 641 - -
Aip01g01013 752 PANTHER OS05G0588300 PROTEIN 60 172 - -
Aip01g01013 752 ProSiteProfiles Protein kinase domain profile. 438 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01013 752 CDD STKc_IRAK 444 738 - -
Aip01g01013 752 Pfam Leucine Rich Repeat 131 152 IPR001611 GO:0005515
Aip01g01013 752 Gene3D Transferase(Phosphotransferase) domain 1 514 748 - -
Aip01g01013 752 SUPERFAMILY L domain-like 81 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01013 Aip-Chr1 20827559 20830524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01013 65 752 Receptor kinase-like Gene Family AT4G37250 52.911 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip01g01013 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01013 - - ahf:112799685 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01013 01 20827559 20830524 Aip01g01013 01 20827559 20830524 ECH